Gene Smed_2921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2921 
SymbolatpC 
ID5323798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3065506 
End bp3065910 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content63% 
IMG OID640791872 
ProductF0F1 ATP synthase subunit epsilon 
Protein accessionYP_001328585 
Protein GI150398118 
COG category[C] Energy production and conversion 
COG ID[COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 
TIGRFAM ID[TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA CTTTCAATTT TGAGCTTGTT TCCCCCGAGC GCCTGCTGGT CTCGGAGACG 
GTGACGGAAG TCGTCATTCC GGCGACCGAG GGCGAGATGA CCGTGATGGC CAATCACGCG
CCGACCATGA CGACCGTCCG GCCGGGCGTA GTCGCGGTGA AAACCGCCGC CGGCAATACC
GAACGCTACG CCGTTTTCGG CGGTTTTGCC GACATCCTGC CGACCGGCTG CACGCTGCTG
GCCGAATCCG CCGTCCATGT CGACGAGCTG GACAGCACGG TTCTCGAGAA CCGCATCGAA
GCGGCACGTG CCGAACTCGA AGGCGCGAGC GACGAGAAGA AAACCCGCCT GGAGCAACTC
GTCGCCGAAC TCACGAAGCT CGGGGAGATC GTGATCCCGG CCTGA
 
Protein sequence
MAETFNFELV SPERLLVSET VTEVVIPATE GEMTVMANHA PTMTTVRPGV VAVKTAAGNT 
ERYAVFGGFA DILPTGCTLL AESAVHVDEL DSTVLENRIE AARAELEGAS DEKKTRLEQL
VAELTKLGEI VIPA