Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2921 |
Symbol | atpC |
ID | 5323798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3065506 |
End bp | 3065910 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791872 |
Product | F0F1 ATP synthase subunit epsilon |
Protein accession | YP_001328585 |
Protein GI | 150398118 |
COG category | [C] Energy production and conversion |
COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAA CTTTCAATTT TGAGCTTGTT TCCCCCGAGC GCCTGCTGGT CTCGGAGACG GTGACGGAAG TCGTCATTCC GGCGACCGAG GGCGAGATGA CCGTGATGGC CAATCACGCG CCGACCATGA CGACCGTCCG GCCGGGCGTA GTCGCGGTGA AAACCGCCGC CGGCAATACC GAACGCTACG CCGTTTTCGG CGGTTTTGCC GACATCCTGC CGACCGGCTG CACGCTGCTG GCCGAATCCG CCGTCCATGT CGACGAGCTG GACAGCACGG TTCTCGAGAA CCGCATCGAA GCGGCACGTG CCGAACTCGA AGGCGCGAGC GACGAGAAGA AAACCCGCCT GGAGCAACTC GTCGCCGAAC TCACGAAGCT CGGGGAGATC GTGATCCCGG CCTGA
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Protein sequence | MAETFNFELV SPERLLVSET VTEVVIPATE GEMTVMANHA PTMTTVRPGV VAVKTAAGNT ERYAVFGGFA DILPTGCTLL AESAVHVDEL DSTVLENRIE AARAELEGAS DEKKTRLEQL VAELTKLGEI VIPA
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