Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2916 |
Symbol | |
ID | 5323793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3060884 |
End bp | 3061741 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791867 |
Product | ABC-3 protein |
Protein accession | YP_001328580 |
Protein GI | 150398113 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGCCA TGCTCGCCGA GCCGTTCTCC TATAGCTATA TGGTCAATGC CATGTGGGTC AGTGCGCTCG TTGGCGCGGT CTGTGCCTTT CTGTCAGCCT ATCTCATGCT GAAAGGCTGG TCGCTGATCG GCGATGCGCT CTCCCACTCG ATCGTGCCGG GAGTTGCCGG CGCCTATATG CTCGGGCTCC CTTTCTCGCT TGGCGCCTTC TTCTCCGGTG CGCTGGCCGC GGCGGCAATG CTGTTCCTGA ACCAGCGCAC GCGGCTGAAG GAGGACACGA TCATCGGCCT GATCTTCACC TCCTTCTTCG GGCTCGGCCT GTTCATGGTC TCCCTCTCGC CAACCTCGGT GAATATCCAG ACGATCGTGC TGGGCAACAT ACTCGCAATA ACGCCGGCCG ACACCGTACA GCTTGCCATC ATCGGCATCG TCTCGCTGCT GATCCTGTGG GCGAAGTGGA AGGATCTGCT GGTGACCTTC TTCGATGAAA GCCACGCCCG TTCGATCGGC ATCAACACCA CCTTTCTCAA AATTCTCTTC TTCACGCTGC TCTCGGCCTC GACGGTAGCG GCGCTGCAGA CGGTCGGCGC CTTTCTGGTC ATCGCCATGG TCGTAACCCC CGGCGCGACC GCCTATCTCC TGACCGACCG TTTCCCGCGG CTGATCTTGA TCAGCATCGT CATAGGGGCA CTGACGAGCT TCTTTGGAGC CTATGCGAGC TACTTCCTGG ACGGCGCCAC CGGCGGCATC ATCATCGTGC TGCAGACGCT GATCTTCCTG TTCGCCTTCG TGTTCGCCCC CAAACACGGG CTGCTCGCCG CCCGCCGCCG CTCAACGGAA GCTCTGGAGA CCGCATGA
|
Protein sequence | MIAMLAEPFS YSYMVNAMWV SALVGAVCAF LSAYLMLKGW SLIGDALSHS IVPGVAGAYM LGLPFSLGAF FSGALAAAAM LFLNQRTRLK EDTIIGLIFT SFFGLGLFMV SLSPTSVNIQ TIVLGNILAI TPADTVQLAI IGIVSLLILW AKWKDLLVTF FDESHARSIG INTTFLKILF FTLLSASTVA ALQTVGAFLV IAMVVTPGAT AYLLTDRFPR LILISIVIGA LTSFFGAYAS YFLDGATGGI IIVLQTLIFL FAFVFAPKHG LLAARRRSTE ALETA
|
| |