| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2915 |
|---|
| Symbol | |
|---|
| ID | 5323792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3059952 |
|---|
| End bp | 3060887 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640791866 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001328579 |
|---|
| Protein GI | 150398112 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTTC AGGAAATGGC CCGCGCCAAT CCGAAAGCAG CTCCGGAAGA GGAAGGGAGC
GGCATTCGCG TCAGCGGAGC CACGGTGACC TACCGCAATG GTCATCGGGC ATTGCGCGAT
GCCTCCTTCA AAATCCCCAC CGGCACGATC GCCGCCCTTG TCGGCGTCAA CGGCAGCGGC
AAGTCGACGC TCTTCAAGGC GATCATGGGC TTCGTGCGGC TGGCGAAGGG CGACATCTCC
ATCCTGGGAA TGACGGTCCC GCAGGCATTG AGGCAGAACC TCGTCGCCTA TGTGCCGCAG
GCCGAAGAGG TGGACTGGAA CTTTCCGGTT CTCGTCGAAG ACGTGGTGAT GATGGGCCGT
TACGGCCGCA TGAACATGCT GCGCATCCCG AAAAAGGCCG ATCACAACGC TGTCGAAACG
GCGCTGGCAA GGGTCGGCAT GAGCGAATTC CGCAAGCGCC AGATCGGCGA GCTGTCCGGC
GGCCAGAAGA AGCGGGTCTT CCTGGCCCGG GCGCTTGCCC AGGACGGTCG CGTCATTCTT
CTCGACGAAC CTTTCACGGG GGTCGACGTG AAAACGGAGG ATGCGATCAT CCGCCTGCTC
GTCGCGCTTC GCGAGGAGGG GCGCGTGATG CTCGTCTCCA CGCACAATCT CGGCAGCGTG
CCGGAATTCT GCGACCGCGC CATCCTCCTG AAGAATACCG TGCTCGCCTA TGGGCCGACG
GAAACCACGT TCACGCGCGA AAACCTGGAA CTCGCCTTCG GCGGCGTACT GCGTCACTTC
GTGCTTGGCG GCGAGAATCT CCACGACGAT GCCGACCCGC GCCAGCTCTC GGTCATCAGC
GACGACGAGC GCCCGCTCGT CATGTATGGC GCCCGCGACC GAATGGTCGC CCAGCCGGCA
AAACCGGAAC CAGACTCCGA GGCGGACTCC GAATGA
|
|---|
| Protein sequence | MNLQEMARAN PKAAPEEEGS GIRVSGATVT YRNGHRALRD ASFKIPTGTI AALVGVNGSG
KSTLFKAIMG FVRLAKGDIS ILGMTVPQAL RQNLVAYVPQ AEEVDWNFPV LVEDVVMMGR
YGRMNMLRIP KKADHNAVET ALARVGMSEF RKRQIGELSG GQKKRVFLAR ALAQDGRVIL
LDEPFTGVDV KTEDAIIRLL VALREEGRVM LVSTHNLGSV PEFCDRAILL KNTVLAYGPT
ETTFTRENLE LAFGGVLRHF VLGGENLHDD ADPRQLSVIS DDERPLVMYG ARDRMVAQPA
KPEPDSEADS E
|
|---|
| |