Gene Smed_2914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2914 
Symbol 
ID5323791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3059050 
End bp3059955 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content60% 
IMG OID640791865 
Productperiplasmic solute binding protein 
Protein accessionYP_001328578 
Protein GI150398111 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAAT CAACGAGGCG CATGATCGTA GCGGCAGCAG CGGCAATGGC CGTCTGTTCC 
ATCATGCCGG CGGCGGCCCC GGCAGCGGAA AAACTCAAGG CAGTCACCAC CTTCACGGTC
ATCGCCGATA TGGCGCAGAA CGTCGCGGGC GACGTCGCAG TGGTCGAATC GATCACCAAG
CCCGGCGCCG AGATCCATAA TTATCAACCG ACGCCGCGCG ATATTCTCAA GGCCCATGAT
GCCGACCTTA TTCTCTGGAA CGGGCTGAAT CTCGAGCTCT GGTTCGAAAG ATTTTTCCAG
AACTTCGACG ACGTTCCGGG GATCGTCGTT TCGCAGGGTG TCGAGCCGAT GGGCATCGCC
GAAGGCCCCT ATACCGGCAA GCCAAACCCG CATGCATGGA TGTCGCCGTC TGCCGCGCTG
GTCTATGTCG ACAACATCCG CGACGCCTTC GTGAAATACG ATCCTGCGAA CGAGGCGGCC
TATAAAGCCA ATGCCGAGGC TTACAAGAAG AAGATCGAGG CGGCCGTGGC ACCGATCCGC
GCTCAGCTCG ACGGGATTCC GCTGGAAAGG CGGTGGCTCG TTTCCAGCGA GGGCGCCTTC
AGCTATCTCG CCCGTGATTT CGGCCTGAAG GAGCTTTATC TCTGGCCGAT CAATGCCGAC
CAGCAAGGGA CGCCACAGCA GGTGCGCAAG GTGATCGACG CGGTTCGGGC CAATAATATC
CCCGTCGTCT TTTCCGAGAG CACCATCTCG CCCGATCCGG CAGAGCAGGT CGCGCGGGAG
ACGGGTGCAA AATACGGGGG CGTGCTCTAT GTCGACTCCT TGAGCGAGGC CGACGGGCCC
GTTCCGACCT ATATCGATCT GCTGCGCGTT ACATCGGAAA CGATCGCGAA AGGCTTGTCG
CAATGA
 
Protein sequence
MIQSTRRMIV AAAAAMAVCS IMPAAAPAAE KLKAVTTFTV IADMAQNVAG DVAVVESITK 
PGAEIHNYQP TPRDILKAHD ADLILWNGLN LELWFERFFQ NFDDVPGIVV SQGVEPMGIA
EGPYTGKPNP HAWMSPSAAL VYVDNIRDAF VKYDPANEAA YKANAEAYKK KIEAAVAPIR
AQLDGIPLER RWLVSSEGAF SYLARDFGLK ELYLWPINAD QQGTPQQVRK VIDAVRANNI
PVVFSESTIS PDPAEQVARE TGAKYGGVLY VDSLSEADGP VPTYIDLLRV TSETIAKGLS
Q