Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2914 |
Symbol | |
ID | 5323791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3059050 |
End bp | 3059955 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640791865 |
Product | periplasmic solute binding protein |
Protein accession | YP_001328578 |
Protein GI | 150398111 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCAAT CAACGAGGCG CATGATCGTA GCGGCAGCAG CGGCAATGGC CGTCTGTTCC ATCATGCCGG CGGCGGCCCC GGCAGCGGAA AAACTCAAGG CAGTCACCAC CTTCACGGTC ATCGCCGATA TGGCGCAGAA CGTCGCGGGC GACGTCGCAG TGGTCGAATC GATCACCAAG CCCGGCGCCG AGATCCATAA TTATCAACCG ACGCCGCGCG ATATTCTCAA GGCCCATGAT GCCGACCTTA TTCTCTGGAA CGGGCTGAAT CTCGAGCTCT GGTTCGAAAG ATTTTTCCAG AACTTCGACG ACGTTCCGGG GATCGTCGTT TCGCAGGGTG TCGAGCCGAT GGGCATCGCC GAAGGCCCCT ATACCGGCAA GCCAAACCCG CATGCATGGA TGTCGCCGTC TGCCGCGCTG GTCTATGTCG ACAACATCCG CGACGCCTTC GTGAAATACG ATCCTGCGAA CGAGGCGGCC TATAAAGCCA ATGCCGAGGC TTACAAGAAG AAGATCGAGG CGGCCGTGGC ACCGATCCGC GCTCAGCTCG ACGGGATTCC GCTGGAAAGG CGGTGGCTCG TTTCCAGCGA GGGCGCCTTC AGCTATCTCG CCCGTGATTT CGGCCTGAAG GAGCTTTATC TCTGGCCGAT CAATGCCGAC CAGCAAGGGA CGCCACAGCA GGTGCGCAAG GTGATCGACG CGGTTCGGGC CAATAATATC CCCGTCGTCT TTTCCGAGAG CACCATCTCG CCCGATCCGG CAGAGCAGGT CGCGCGGGAG ACGGGTGCAA AATACGGGGG CGTGCTCTAT GTCGACTCCT TGAGCGAGGC CGACGGGCCC GTTCCGACCT ATATCGATCT GCTGCGCGTT ACATCGGAAA CGATCGCGAA AGGCTTGTCG CAATGA
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Protein sequence | MIQSTRRMIV AAAAAMAVCS IMPAAAPAAE KLKAVTTFTV IADMAQNVAG DVAVVESITK PGAEIHNYQP TPRDILKAHD ADLILWNGLN LELWFERFFQ NFDDVPGIVV SQGVEPMGIA EGPYTGKPNP HAWMSPSAAL VYVDNIRDAF VKYDPANEAA YKANAEAYKK KIEAAVAPIR AQLDGIPLER RWLVSSEGAF SYLARDFGLK ELYLWPINAD QQGTPQQVRK VIDAVRANNI PVVFSESTIS PDPAEQVARE TGAKYGGVLY VDSLSEADGP VPTYIDLLRV TSETIAKGLS Q
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