| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2901 |
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| Symbol | |
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| ID | 5323778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3044552 |
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| End bp | 3045322 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791853 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001328566 |
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| Protein GI | 150398099 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCATC CGGCCTTGTT CAAGGGCATG AACGTGGTGG TTACCGGCGG CGGGAGGGGC
ATTGGCCTCG AGGTCGCGCG GCAGTTCCTG GATTGCGGTG CCCGTGTTCT GGTGCATCTG
GGGCGGACGA TCGCATCCGA CCGCCCGGAG TTTCTCGATC TTGCAGCGGC AGAGGGCAGG
GCATTCCTCA CGGCGGCGGA TTTCCTTTCG GACGGGGGCG TGGAGAGCCT TGCCGACGCG
GTGAGGAGCC GTTTCGACAG CGTCGACGTT CTCGTCAACA ATGCCGGCAC GATGGTCGGT
CGTTTTCCGG CCGGCGAACT CACCGACGAC GACTACCGCA CTGTCGTGAA GCTCAACCAG
ACCTCGGTGG TCGAGATGAC CCGGACGATG TTACCGCTCC TGCGCAAGGG CACGCACCCG
GCGATCGTCA ACACCGTCTC CATCTCGGCA CGCGCGGGCG GCAGTCCCGG CTCTTCGATC
TATTCCGCCA CCAAGGCCTT CGTTTCCACC TATTCCAAGG CTCTGGCGCG CGAACTTGCG
CCGGAAGGCA TCCGCGTCAA CTGCGTCTCG CCCGGCACGA TCGCGACGGA TTTCCACGAA
CGCTATTCGA CGCCGGAGAA GCTCGAGGCG ACGCGTAAGA CGATTCCGCT AGGTCGGCTG
GGGATGGCCG AGGATTGCGC GCCAGCCTAC CTCTTCCTCG CTTCGCACGC GCTTTCAGGT
TACATCACCG GCCAGGTTCT GGAGGTGAAC GGTGGGCAGC TCATCGCTTG A
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| Protein sequence | MYHPALFKGM NVVVTGGGRG IGLEVARQFL DCGARVLVHL GRTIASDRPE FLDLAAAEGR
AFLTAADFLS DGGVESLADA VRSRFDSVDV LVNNAGTMVG RFPAGELTDD DYRTVVKLNQ
TSVVEMTRTM LPLLRKGTHP AIVNTVSISA RAGGSPGSSI YSATKAFVST YSKALARELA
PEGIRVNCVS PGTIATDFHE RYSTPEKLEA TRKTIPLGRL GMAEDCAPAY LFLASHALSG
YITGQVLEVN GGQLIA
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