Gene Smed_2898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2898 
Symbol 
ID5323775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3041357 
End bp3042913 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content64% 
IMG OID640791850 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_001328563 
Protein GI150398096 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTAA GAATCTTTAT TCCCCGGGAT GCAGCAGCCT TGGCGCTCGG CGCCGAAAGC 
GTGGTGGAGG CGATTTCCGG CGAGATCGCC GCTCGCGCGC TCGACGCCAC GATCGTCCGC
AACGGCTCTC GCGGCATGCA CTGGCTGGAG CCGCTGGTCG AAATCGAAAC GGCCGATGGG
CGCGTCGCCT ACGGGCCGGT GAAAGCGGGC GACGTGGCCT CGCTTTTCGA TGCCGGGCTG
ACTTCGGGTG GTGCGCATCC GCTCTGTCTC GGCAAGACCG AGGAAATTCC GTTCCTCAAG
CGACAGACGC GGCTTACCTT TGCCCGCTGC GGTGTCATCG ACCCGCTCTC GCTCGATGAT
TATCGGGCTC ATGGAGGCCT GCGCGGCCTC GAAAGAGCAG TCGTCATGCA GCCTGCGGCG
ATCGTTGCCG AGGTCACGGA AAGCGGTCTT CGTGGCCGCG GCGGTGCCGG CTTCCCGACC
GGGATCAAAT GGAAGACCGT GCTCGAAACG CCGGGTGCGC GGAAATACAT CGTCTGCAAT
GCCGACGAGG GTGACAGTGG CACATTCGCA GACCGTATGA TCATGGAAGG CGACCCCTTC
GTGCTGATCG AGGGCATGGC GATCGCCGGC ATCGCGACTG GCGCAACCAA GGGCTACATC
TATACGCGCT CGGAATATCC GCATGCGATC GCGGTGATGA GCGCAGCGGT CGAGATCGCC
CGGGCCGCCG GTGTGCTCGG CACCTCTGTG CTCGGCTCTG CGCATGCCTT CGATATGGAG
GTTCGCACCG GCGCCGGCGC CTATGTCTGC GGCGAGGAGA CTTCGCTCCT GAACAGCCTC
GAAGGCAAGC GCGGACTGGT GCGCGCCAAG CCGCCGCTGC CGGCGCATAA GGGCCTTTTC
GATCGCCCGA CCGTCATCAA CAACGTCATC TCGCTCGCGT CCGTACCGGT GATTCTCGAC
AAGGGTGCCG GCTACTATCG CGATTTCGGC ATGGGCCGGT CGCGCGGAAC GATCCCGCTG
CAGATCGCCG GCAATGTAAG GCATGGCGGG CTTTTCGAAA CCGCTTTCGG CCTGACGCTT
GGCGAGATCG TCGACGAGAT CGGCGGCGGC ACCGCGAGCG GCAGACCCGT GAAGGCCGTG
CAGGTCGGCG GTCCGCTTGG CGCCTATTTC CCACGGGCGC TGTTCGATAC GCCATTCGAC
TACGAAGCCT TCGCCGCCAG GGACGGGCTT ATCGGTCATG CCGGCATCGT CGTCTTCGAC
GACACGGCCG ACATGCTGAA GCAGGCGCGT TTCGCCATGG AATTCTGCGC CATAGAGAGC
TGCGGCAAGT GCACGCCCTG CCGCATAGGT TCCATACGCG GTGTCGAGGT TGCCGACGCG
ATCGCGGCCG GCATCGAGCC GGAAAAGAAT CGAGTGCTGC TTGCCGATCT CTGCAACACG
ATGAAGTTCG GCTCTCTTTG CGCACTCGGC GGCTTTACGC CCTATCCGGT GATGAGCGCC
ATGACGCATT TCCCGGAGGA TTTTTCACCA GTGCCGATGG TGGAGGCTGC GGAATGA
 
Protein sequence
MTVRIFIPRD AAALALGAES VVEAISGEIA ARALDATIVR NGSRGMHWLE PLVEIETADG 
RVAYGPVKAG DVASLFDAGL TSGGAHPLCL GKTEEIPFLK RQTRLTFARC GVIDPLSLDD
YRAHGGLRGL ERAVVMQPAA IVAEVTESGL RGRGGAGFPT GIKWKTVLET PGARKYIVCN
ADEGDSGTFA DRMIMEGDPF VLIEGMAIAG IATGATKGYI YTRSEYPHAI AVMSAAVEIA
RAAGVLGTSV LGSAHAFDME VRTGAGAYVC GEETSLLNSL EGKRGLVRAK PPLPAHKGLF
DRPTVINNVI SLASVPVILD KGAGYYRDFG MGRSRGTIPL QIAGNVRHGG LFETAFGLTL
GEIVDEIGGG TASGRPVKAV QVGGPLGAYF PRALFDTPFD YEAFAARDGL IGHAGIVVFD
DTADMLKQAR FAMEFCAIES CGKCTPCRIG SIRGVEVADA IAAGIEPEKN RVLLADLCNT
MKFGSLCALG GFTPYPVMSA MTHFPEDFSP VPMVEAAE