Gene Smed_2892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2892 
Symbol 
ID5323769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3033587 
End bp3034066 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content60% 
IMG OID640791844 
Productputative CheW protein 
Protein accessionYP_001328557 
Protein GI150398090 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.953703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA TGCCGAAAGC AGCCGCATTT GACGGCGAGA CGCTTGAGAT CATAGCGTTC 
CGCCTGCACG AACAGGAATT TTGCGTCAAG ACCACGACGA TCCGCGAGAT CCGCGGCTGG
GCCCCGTCGA CGCCCATTCC GCATGCTCCG CCGGAGGTGA TCGGCGTTAT GAATCTGCGC
GGTACGGTGA TCCCTATCAT AGACCTCGCT CACAAGCTCG GCATGAAGTC GACCGTCACC
AACGAACGCA GCGCGATCGT GGTCGCCGAG GTCCACAACA TGGTCATCGG GCTCGTCGTC
GACCGCGTTT CCGACATTCT GACCGTGCAG GGCAGCCAGG TGCAGCCCGT GCCGGAAGTC
ACCGCCTCTT TCGACAAGAG CTTTGCGGAA GGCATCATCG CCAATGATCA GGGCATGATC
TGCTTCCTCA ATCTCGCCCG CATGTTCAAG GAGCGGGAAA ACGACGAACT GGCCGCCTGA
 
Protein sequence
MTTMPKAAAF DGETLEIIAF RLHEQEFCVK TTTIREIRGW APSTPIPHAP PEVIGVMNLR 
GTVIPIIDLA HKLGMKSTVT NERSAIVVAE VHNMVIGLVV DRVSDILTVQ GSQVQPVPEV
TASFDKSFAE GIIANDQGMI CFLNLARMFK ERENDELAA