| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2888 |
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| Symbol | |
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| ID | 5323765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3025440 |
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| End bp | 3031049 |
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| Gene Length | 5610 bp |
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| Protein Length | 1869 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791840 |
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| Product | hypothetical protein |
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| Protein accession | YP_001328553 |
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| Protein GI | 150398086 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.547557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGG TCACCCGCTT CCTTCGATCT GCGCTGCGGT ACTTCTTTGC CGCCCTCGGC
ACCCTCGTGG TCGTTCTCCT CCTGCTCGTG GCGTTTCTGG GCTTCACGGT ACCCGGCGCC
CGCGTCGTCG CCTGGGCGAT CGAGAAATAC GCGGCAACCC CCGACCAGAT CGTGCGCATC
TCCGAGCCGG GCGCCCTCCT GACCGGCGAT TTCACCGCCG GCACCATTAC GCTCTTCGAT
GGCAAAGGCA TTTATGCGGA GGTCCGCGAC CTCTCGGTGG ACTGGTCGCC TGCCGAGCTT
CTCTCACTTC GCTTCGACGC GAGCAGGATT ACGGCTGGTT CGATCCGAGT AGAGCGGCTG
CCGGTCCCCT CGACCGAGAC CAGGAAGGTC CGTTCGACCT TCGCCCTTCC GGTCGACGTG
AAAATCGACG CCTTCGATCT CAAGGAAGTC GTCCTCGGCA AGCAGATCGC CGGCGAGGAC
CATTTCCTGA CGGCCCAGGG CGAGCTGAAC GCGACGAATT CCAGTGTCGC TCTCGTGCTC
GATGCCGCCG AACGGGACCG CCCGGATGCG CGAGCAACCG CCGATCTCGT CTTCAATCCG
GCCGGCAACC AGCTGAAACT CGAAGCGGAA CTGACGGAGC CGAAGCGCGG CCTTCTGGCG
AGGCTGCTGC GCCTCCCCGG AGAACCTGCC GTCAACATGA CCGTGACCGG ACAGGGGCCG
CTTTCCGATT GGACGGGCTC AGGCACGGTT TCGCTCGACG GAAGCGAGAT CCTTCGCCTT
GACGGCCGGC ACGTGCTCGC CGCCGAGGAG ACGCACCAGC TGACGGTTTC CGGCGGCGGC
GCCTTCGCCA CGCTGATGCC GCCCGCGTTC AGGCCGCTCT TCGAGGGGAC TAGCAGAATC
GACCTAAGGG CGGCGTTCGA TGGCAGAAGC ATGGTCCGGA TCGAAACGGG CAAGGTCTCG
ACCGGCGCTC TGACGCTCGA CATTTCCGGT ACCGTCGACA GCCGAGGCGA AAACAATCTC
AAGGCAAGTC TCACCGGCAC CAGCGGCCCG TTCGATTTCC GCTGGCCGTT GAAGGATGGC
GAGTTGCAGG CGCTTATCGA TACGGCAAAC GTGTCGCTGA TCGGCGACGG ACAATCCGCC
ATCCTCGACA TCGCAGCCGA CATATCCTCC GTGAACCTGC CGCAGGCCCG CCTCGGCGGC
ATCCGGCTTT CGGCCCAGAG CGACGCCTTC AATCTGGAAA CCCGGTCGGG CCCCTTGAAG
ACGACCGTAG AGATCGCCGA GAGCCGCTTC GCAAATGCCG ATCTCGACCG GGCCGTACAG
GCACCGGTCA AGCTGGACGG CACTATTGCC ATCGCTCCGG AAGACATCCG TTTCGATCCG
CTGACGATCG AGAGCGCAAG CATTGGCGGC ACGGTCTCCG GCAGTTTCGA TCGCGCCGAG
ACAACGCTTG AGGCGGCGTT CAAGGTCTTC GCCGTGAGAG AGGTACTGCC CCCGGCGCTT
GTCGAAAAAT TCGACAGGAC GATCGCTCTC TCCGGCAACG CAGTCGTGGA GCAGGACGGC
AGCGTCCGGT TGAGCGGACT GGACGTCAAA TCCGGTGCGG TCGACGCCTC TGGCACCGTT
GCACTTGCGG GGAGCATATT GACTGCGGAC ATCGAGGGAA CGCTTCCCGA TCTCGGACGG
CTTCTCGCCG ATGCGCAGGG CTCGGCCGCC TTCCATGCGC TCGCATCCGG CCCGCTCGAC
AAGCTCGGCA TCGAAGCGGA GATAACCTCC AACGGTGCGA CGCTTGCCGG CCGCACGCTG
GACGATCTCG TCGTCAATGC CGATGCGACC ATCATGCCGG AAAGTCCCGA AGCGAAGCTG
ACGGCAACCG GCACCCTCGA CGGTCAGGCA ATCGACCTTC GCGCCGACGT GGTATCCAGG
GATGGCCGCA CCTCGATCCC CACTCTCGAA GCCAAGGTCG GCGAAAACCG GCTGACCGGG
GCGATTGACC TGACCTCCGA CTTCAAGCCG AACGGACAAA TCGACTTCAA CCTGCCCGAT
TTCGGCCTCA TCGCCGCCAT GGCCGGGCAG CAGGCATCCG GCGATCTCGC CGGATCCGCG
ACGATCCGGA CCGAAGAGGG CGTTACGTCG CTCGCGCTGA CAGCTCGCGG CGAGAGCATC
AAGCGCGACG CATTGACGGT TGCCGCGCCC GTGGTCGACG TCAACGTCTC CGATATTGCA
AAACTGGCGA TCAAGGGCGG CATCAAGGCC GAGAGCGCCG CACAGGGCGA GAATCGCCTG
ACGGACATCG ACATCGCTTT CGAGCAGCAG GCAGACCGAA CGGGCTTCTC GATCAATGCG
GAGTATGACG GCGCGCCGCT GGCAGCGACC GGTGATCTGG CGAGCCTTGA CGGCAGAACC
GAGATCCGCC TCGCATCGGC CTCGGCTGTA GTCAAGCGCA TTCCACTGCA GCTTGCCAGA
CCCAGCGTCG TCGCGGTCGA AAACGGTGTC GTGCGTATCG ACGGGCTGAC GATCCAGGCC
TCGACGGGTA CGGTCTCCGT CACCGGCACC GCCGGCGAAG CCTTGGAGAT CTCGGCTGAC
ATCAACGGCC TGCCCGCCAC CCTGATCAAC AGCTTCGCAC CGACGCTCGG GGCCGAGGGC
TCGATTGGAG GCAAGGTCGA CGTCGCCGGC GACGCCGGGA CACCGGTCGT GCGCTACGAC
CTCACCTGGA GCGGCGCTTC GATCGCCTCC GTGCGGTCGG CCGGCGTAGA GGCAGAGGAC
CTGTCCGCGA AGGGGACCGT GACGGTCGCC GAGGACAGCA TCCGCCTCGA TCCCCTGGCC
ATCGAACGCG CGGGTTTTCG CGGCGATATG ACGGCAAGCC TCGACCGCGC CGACATGACG
GCCGAAGCGG ATTTCCAGTT CGTTGCCGAA CCCGTCGTTC TCCCGGCCGG CATCGGCGCG
AAGTTCGATG CGCCGGTCAA CGTCTCGGGC AAGGTCGCGA CAGGGGCCGG CGGGAGGATC
GAACTGAGCG CGCTCGAGGT CAGATCCGGT ACCGTCAACG CCACCGGCTC CGCCGCACTC
GCCGAAGGCG CACTGACGGC GGAGATCGAG GGCGCATTGC CGGACCTCGG CAAACTGCTC
GCCGACGCCA AAGGCAGAGC CATCTTTACC GCCGACGTCT CCGGGCCGCT CGATGCGCTC
GGCGTCAAGG CGGAAGTGAC CTCCAGCGGC GCGGCTCTCG CCGGGCGAAC GCTCTCGGAT
TTCGTGATCA CGGCCGACGC GACCGCCAGA CCTGGCAGCC CGCAGGCAAA GCTGACAGCG
ACGGGAGCCC TCGACGGTCA GCCGATCGAC GTCAAGGCCG AAGTGGTTTC GAAAGACGGC
CAAACCTCGA TTCCGACCCT GGAGGCGAAG ATCGGCGATA ACCGGTTGAC GGGCCGGATC
GACCTGGCGA CAGGCTTCAA GCCGGAGGGT ACGATCGACT TCAACCTCCC CGATCTCGGC
CTGCTAGCCG CCATGGCCGG CGAGAGGGTT TCCGGAGATC TTTCCGGCTC CGCATCTATC
AGAACGGCGG ACGGTGTAAC TTCGGTATCG CTGAAGGCGA GCGGCAGCGG CATCAAACGC
GGTGATCTTA CGATCGCAAA GCCGGTTGCC GATATCAGCA TCGCCGATGT GGCGGCACTC
GCGATACGGG GAAGCGTCAA GGCGGAAAGC TTGGCCCAGG GTCAGAATCG CGTCACCGGG
CTCAATCTCA CCTTCAATCA GCAGGGGGGC AGAACCGGCT TTGCCATCGA CGGCAGATAT
GATGGCGGAC CTCTCTCGGC GAGAGGCGAC ATGACGGCAA GCGGCGGACG CACCGAAATC
CGGCTGGCTT CATTCGCGGC AAGTCCGAAG CGAATACCGT TGAAACTTGC GCGTCCTACC
ATCGTCGCCA TCGACAACGG CACAGTGCTT CTCGATGCCC TGACCATCGA GGCATCGAAG
GGAACCGTCA CGGTGGCCGG CTCAGCGGGA CAGACGCTCG ACATCTCGGC CAAACTCAAC
GCGCTGCCAG CCGCGCTGAT CAACACCTTC GCCCCGACGC TCGGAGCGGA AGGCACGATC
GCCGGTACGG TGGACCTGGA CGGAACGGCG GCGGCTCCGG TCGTCGTCTA CGACCTGAGA
TGGAGCGGCG CCTCGGTTGC CGCGGCACGT GGCGCCGGCG TGTCCTCGCT GGACGTTGCG
GCAAAGGGCC GCTTCGCAGA CAACCGGGTG ACCGTCGATG CCACTGTCTC CGGTCCGGGA
AATCTCTCCT TCCGAGGCGG CGGCAATGTC GATCTCGGCG GCAACATGCC TATCTCGATG
AAGTTCGCCG GCGACGTGCC GTTCGCTCTG CTTGCCAATA TCATGGCGCA GCAGGGCTTT
ACCCTGACCG GGTCGGCCCG GGTCGATCTG GCGCTCTCCG GCTCGGCAAG GGCGCCGCAG
ATTGCCGGCA CCGTCTCTAC TTCTGGCGCC CGGCTGGTGG ACGTTCGCCG CAATCTCGCG
CTCAACGACC TAACGGCCAA TGTCGCGCTC GACGGAAGAC AGGCGACGAT CTCGCGCCTC
TCGGCCAATC TCGCCAGCGG CGGATCGGTC GCGGCGAGCG GAACCATTGG CATCGTCCCC
GGCTCCGGCT TCCCCGCAGA CCTCAGAATC CGGCTCAACG ACGCTACTTA TGTCGACGGC
ACGCTGTTTA CCGCAAACCT GGCCGGCGAC CTGACGCTCA ACGGCCCGCT CGTCTCGTCG
CCCGTGCTTG GTGGAAGATT GACGATCCGC AGGGCCGCGA TCACCATACC GGAGAGGCTG
CCGGCCTCGC TCTCGGAAAT CGACATCAAG CATCGCAACG CCCCGGCTAG CGTTCGGCAG
ATGACGAAAG ACCTGCGCCG GGATACGTCC GCAGGCACCG AGGCGAGCGG CGCCATCGCC
TTCGATCTCG CGGTCAATTC ACCGGGCCAG TTTTTCGTAC GCGGGCGCGG CATCGATGCC
GAACTCGGCG GCGATCTGAC GATCCGCGGC ACTGCCGTCC AGCCGATCGT TTCCGGCGGA
TTCGACATGC GCCGCGGGCG CCTTGAGATT CTCGGCAAAC GCCTGACCTT TACCGACGGT
CACATCGGCT TCGGCGGAGA CCTCATTCCC ACGCTTAATC TCGACGCCAC GTCGAGCGCC
GGCTCGACGA CGATTACCGT CAACGTCGCC GGTCCTGCAA ACAACCCGAG GGTGACCTTC
TCCTCGTCTC CTGCGCTTCC GCAGGATGAG ATCCTGGCGC AGCTCATCTT CAACCGGTCG
CTCAACAATC TCTCCGCCTT CCAGATCGCA CAGCTCGCTT CGGCCGTGGG CCAGCTTGCC
GGCGGCGGCT CCACGTCGCT GCTCGACGGG CTGCGCAACA AGCTCGGCGT CGACGATCTC
GACGTCACGA CCGACGAGAG CGGCGGCGCT CAGGTACGCG CCGGAAAATA TCTGAACGAC
CGGACCTATC TCGAATTGCA GCAGGGTTCC GACTCGGCCT CCAGCAAAGC GATCATCAAT
CTCGATATCG GCCGGGGCGT GAAACTGAAG GGCGAAGCAG CCGGGGACGG CTCGGCCGCC
GGTGGCATAT TCTTCGAAAG GGAATATTGA
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| Protein sequence | MNQVTRFLRS ALRYFFAALG TLVVVLLLLV AFLGFTVPGA RVVAWAIEKY AATPDQIVRI
SEPGALLTGD FTAGTITLFD GKGIYAEVRD LSVDWSPAEL LSLRFDASRI TAGSIRVERL
PVPSTETRKV RSTFALPVDV KIDAFDLKEV VLGKQIAGED HFLTAQGELN ATNSSVALVL
DAAERDRPDA RATADLVFNP AGNQLKLEAE LTEPKRGLLA RLLRLPGEPA VNMTVTGQGP
LSDWTGSGTV SLDGSEILRL DGRHVLAAEE THQLTVSGGG AFATLMPPAF RPLFEGTSRI
DLRAAFDGRS MVRIETGKVS TGALTLDISG TVDSRGENNL KASLTGTSGP FDFRWPLKDG
ELQALIDTAN VSLIGDGQSA ILDIAADISS VNLPQARLGG IRLSAQSDAF NLETRSGPLK
TTVEIAESRF ANADLDRAVQ APVKLDGTIA IAPEDIRFDP LTIESASIGG TVSGSFDRAE
TTLEAAFKVF AVREVLPPAL VEKFDRTIAL SGNAVVEQDG SVRLSGLDVK SGAVDASGTV
ALAGSILTAD IEGTLPDLGR LLADAQGSAA FHALASGPLD KLGIEAEITS NGATLAGRTL
DDLVVNADAT IMPESPEAKL TATGTLDGQA IDLRADVVSR DGRTSIPTLE AKVGENRLTG
AIDLTSDFKP NGQIDFNLPD FGLIAAMAGQ QASGDLAGSA TIRTEEGVTS LALTARGESI
KRDALTVAAP VVDVNVSDIA KLAIKGGIKA ESAAQGENRL TDIDIAFEQQ ADRTGFSINA
EYDGAPLAAT GDLASLDGRT EIRLASASAV VKRIPLQLAR PSVVAVENGV VRIDGLTIQA
STGTVSVTGT AGEALEISAD INGLPATLIN SFAPTLGAEG SIGGKVDVAG DAGTPVVRYD
LTWSGASIAS VRSAGVEAED LSAKGTVTVA EDSIRLDPLA IERAGFRGDM TASLDRADMT
AEADFQFVAE PVVLPAGIGA KFDAPVNVSG KVATGAGGRI ELSALEVRSG TVNATGSAAL
AEGALTAEIE GALPDLGKLL ADAKGRAIFT ADVSGPLDAL GVKAEVTSSG AALAGRTLSD
FVITADATAR PGSPQAKLTA TGALDGQPID VKAEVVSKDG QTSIPTLEAK IGDNRLTGRI
DLATGFKPEG TIDFNLPDLG LLAAMAGERV SGDLSGSASI RTADGVTSVS LKASGSGIKR
GDLTIAKPVA DISIADVAAL AIRGSVKAES LAQGQNRVTG LNLTFNQQGG RTGFAIDGRY
DGGPLSARGD MTASGGRTEI RLASFAASPK RIPLKLARPT IVAIDNGTVL LDALTIEASK
GTVTVAGSAG QTLDISAKLN ALPAALINTF APTLGAEGTI AGTVDLDGTA AAPVVVYDLR
WSGASVAAAR GAGVSSLDVA AKGRFADNRV TVDATVSGPG NLSFRGGGNV DLGGNMPISM
KFAGDVPFAL LANIMAQQGF TLTGSARVDL ALSGSARAPQ IAGTVSTSGA RLVDVRRNLA
LNDLTANVAL DGRQATISRL SANLASGGSV AASGTIGIVP GSGFPADLRI RLNDATYVDG
TLFTANLAGD LTLNGPLVSS PVLGGRLTIR RAAITIPERL PASLSEIDIK HRNAPASVRQ
MTKDLRRDTS AGTEASGAIA FDLAVNSPGQ FFVRGRGIDA ELGGDLTIRG TAVQPIVSGG
FDMRRGRLEI LGKRLTFTDG HIGFGGDLIP TLNLDATSSA GSTTITVNVA GPANNPRVTF
SSSPALPQDE ILAQLIFNRS LNNLSAFQIA QLASAVGQLA GGGSTSLLDG LRNKLGVDDL
DVTTDESGGA QVRAGKYLND RTYLELQQGS DSASSKAIIN LDIGRGVKLK GEAAGDGSAA
GGIFFEREY
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