Gene Smed_2881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2881 
Symbol 
ID5323758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3015678 
End bp3016475 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID640791833 
Productcarbon-monoxide dehydrogenase (acceptor) 
Protein accessionYP_001328546 
Protein GI150398079 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAGA CCAACTATCA TAGGGCCGCC TCGATCGAGG AGGCGGCAAA GCTGATGGGG 
ACCGTGGCGG AGGGCAAATA TCTCTCCGGT GGCATGACGC TCATTCCCAC GATGAAGCAG
CGGCTTGCCG CGCCGAGCGA CCTCGTCGAT CTCCGGCACA TTGCCGAGAT GAAGGGCGTC
ACCGTCGACG GCCGCGCGGT GAGGATCGGC GCGGCGACAA CGCACGAGGA GGTCGCGACG
TCAGCCGCAA TCGCCGCCGT CTGTCCGGCC ATTTGCGGGC TTGCCAGCCA CATCGGCGAC
CCGCATGTCC GTCATATGGG TACGATCGGA GGCTCCATCG CCAACAACGA TCCGGCCGCA
GACTATCCGG CCGCTATGCT GGCACTGGAC GCGGTAATCA TGACCGACAG GCGAGAGCTC
AGGGCCGAAA ACTTCTTCAC GGGCCTTTTC GAAACGGCGC TGGAGGAGGA CGAGATCGTG
ACTGCCGTCC GCTTCGAAGC ACCGGTGAAG GCGGCCTATC AGAAGTTTGC CAATCCGGCA
TCGCGCTACG CGATGACAGG CGTCTTCGTC GCCCGCCGCG ACGATGGCGT CGTGCGTGTT
GCGGTCACCG GAGCCGGGTC GAGCGGCGTC TTCCGCCATC AGGGCCTTGA GACGGCACTT
TCGGCCAATT GGTCTCCGGC TGCGGTCGCC AATGTGACAG TGGACGATTC GGACCTGCTT
TCCGATATTC ATGCAAGCGC GGCCTATCGG GCCAATCTCG TCAAGGTGAT GGCGAAAAGG
GCAGTAGCGG CTGCCTGA
 
Protein sequence
MYETNYHRAA SIEEAAKLMG TVAEGKYLSG GMTLIPTMKQ RLAAPSDLVD LRHIAEMKGV 
TVDGRAVRIG AATTHEEVAT SAAIAAVCPA ICGLASHIGD PHVRHMGTIG GSIANNDPAA
DYPAAMLALD AVIMTDRREL RAENFFTGLF ETALEEDEIV TAVRFEAPVK AAYQKFANPA
SRYAMTGVFV ARRDDGVVRV AVTGAGSSGV FRHQGLETAL SANWSPAAVA NVTVDDSDLL
SDIHASAAYR ANLVKVMAKR AVAAA