| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2879 |
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| Symbol | |
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| ID | 5323756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3012811 |
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| End bp | 3013986 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791831 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001328544 |
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| Protein GI | 150398077 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCG GCGATGAGTT GAAGCGCCGC CTGACGATAT TGGGCTCCAC CGGATCGATC
GGAACCAGCA CGCTCGACGT GATCGAGCGG CTCGGCGGAC GCGATCGGTT CGAGGTTGCT
GCACTGACGG GTAACGGCAA CATACCGCTG CTTGCCGCGC AGGCCCGCCG TATGGGTGCA
GAGCTCGCGG TCACCGCAGA CGGGGATCGT TATGGCGAAC TCAAGGATGC GTTGAGCGGC
AGCGGCATCG AGGTCGCGGC CGGCCGAACT GGTCTGAGCG AGGCGGCAGA GCGCGATGCC
GGCTGGGTGA TGGCCGCCAT CGTCGGGAAT GCCGGCCTTG GCCCCACCCT TGCAGCTGCC
CGTCGCGGCG CCGACATCGC GCTGGCCAAC AAGGAATGCC TTGTTTCCGC CGGCAGCCTT
TTCATCGATG CCGTGGCCGA GGGCGGCGGC CGGCTGCTGC CCGTCGACAG CGAACACAAT
GCAATCTTTC AGGTCTTGGA GAACGATCAG CGTCATGCCG TGGAACGCAT CGTGCTCACC
GCCTCCGGCG GCCCCTTTCG CACCAAGTCG CTCGACGAGA TGCAGCACGT GACCGCAGAG
GCCGCCCGCG CCCATCCGAA CTGGTCGATG GGGCTCAAGA TTTCGATCGA CAGTGCCTCG
ATGTTCAACA AGGCGCTCGA GATGATCGAG GCGCGCCACC TTTTCAACCT GCGACCGGAT
CAGATCGAGG TGATCGTTCA TCCACAATCG GTGGTCCACT CGATGGTCGG TTACGCGGAC
GGCTCGGTGC TGGCACAACT CGGCTGCCCC GACATGCGCA CCGCGATCGG CTACGCCCTT
TCCTACCCCA GACGCTGCGA TCTGCCAGTC GAACGGCTCG ACTTCGCCAG GCTCGCGCGG
CTCGATTTCG AGGCGCCGGA CGAGGTGCGG TTCCCGGCGC TCAGGCTCGC ACGCCGTGCG
ATGGAGGAAG GCGGCCTACA GGGCGCAGTG CTGAACGGTG CCAAGGAAAC GGCGCTGGGG
GCCTTCATCG AAGGCCGGGT CGGCTTCCTC GACATGGCTG AAATCGTCGA AGAGGTGATG
AACGATCTTG CCGGCCTGCC GGCCGCCACG AGCATGGACG ACGTTTTCGC GGCGGATGAG
CAGGCCAGGC AGGCGGCCGC TGGGATGATC CCTTAG
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| Protein sequence | MASGDELKRR LTILGSTGSI GTSTLDVIER LGGRDRFEVA ALTGNGNIPL LAAQARRMGA
ELAVTADGDR YGELKDALSG SGIEVAAGRT GLSEAAERDA GWVMAAIVGN AGLGPTLAAA
RRGADIALAN KECLVSAGSL FIDAVAEGGG RLLPVDSEHN AIFQVLENDQ RHAVERIVLT
ASGGPFRTKS LDEMQHVTAE AARAHPNWSM GLKISIDSAS MFNKALEMIE ARHLFNLRPD
QIEVIVHPQS VVHSMVGYAD GSVLAQLGCP DMRTAIGYAL SYPRRCDLPV ERLDFARLAR
LDFEAPDEVR FPALRLARRA MEEGGLQGAV LNGAKETALG AFIEGRVGFL DMAEIVEEVM
NDLAGLPAAT SMDDVFAADE QARQAAAGMI P
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