| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2878 |
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| Symbol | |
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| ID | 5323755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3011926 |
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| End bp | 3012651 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791830 |
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| Product | protein of unknown function DUF306 Meta and HslJ |
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| Protein accession | YP_001328543 |
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| Protein GI | 150398076 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[R] General function prediction only |
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| COG ID | [COG3187] Heat shock protein
[COG3895] Predicted periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAG CCCTGACCGC CGCATCCTGC GCTTGCGTGC TGATAGAACT TGCCTCGATG
CGGACGGTTG CCGCCGAAAA GGTCCCGGAG CAGCTCGTCG GGTCCTGGCT GGCCGAAGAC
ATGGGCGGTC GTGGTGTGAT CGACGATCTT CAAACCACCC TTGAGATCCG CGAAGACGGG
ACCTATGGCG GCATGGCCGG CTGCAATCAT TTTACCGGGG CGTTCAGCCT TTCGGGCGCA
ACGATCTCGT TCGGCTTCGC AGCGGCGACA CGCAAGATGT GCGTACCCGC GGCAATGGAT
CAGGAGCGCA AATTTCTGAA TGCTCTCGGA GACGAACTGA GTTGGAAAAT AGAGGGGAGC
AAGCTGACGC TCGCGAGGCC GAACGGCCCG CCTGTCATTC GCTTGACCTT CATGGATTCC
CGGGCCTCGG GCGGTGCCGA ACTCAAGCTC CGCATCCCCG GCGCCGACGC CGTCGAGCGG
CAGATCGTCC GCTATCAATG TGCCGGCAAG ACGGTCCAGG CGGAGTATAT CAATGCCGGT
CCCGTTTCGC TCGCGACACT GGCGATCGAG GGCACCTTCA TCGTCGCGTC GAACGTCATT
TCCGGATCGG GTGCCAGATA TGCCGGCGGG CAGTATGTCT GGTGGACGAA GGGCGACGAG
GCGAGGCTTT TCGATACGAT GGAGGGCGAG GAAGACCCGG GAATCCTGTG CAGGAAAACG
GAATAG
|
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| Protein sequence | MLQALTAASC ACVLIELASM RTVAAEKVPE QLVGSWLAED MGGRGVIDDL QTTLEIREDG
TYGGMAGCNH FTGAFSLSGA TISFGFAAAT RKMCVPAAMD QERKFLNALG DELSWKIEGS
KLTLARPNGP PVIRLTFMDS RASGGAELKL RIPGADAVER QIVRYQCAGK TVQAEYINAG
PVSLATLAIE GTFIVASNVI SGSGARYAGG QYVWWTKGDE ARLFDTMEGE EDPGILCRKT
E
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