| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2869 |
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| Symbol | |
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| ID | 5323745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3001539 |
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| End bp | 3003134 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791820 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001328534 |
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| Protein GI | 150398067 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGT TCGACTACAT CATCGTCGGA GCGGGCAGTG CCGGCTGCGT GCTCGCCAAT
CGCCTGTCGG AAAACCCGGA TCGCCGCGTT CTGTTGCTGG AGGCCGGCGG CAGCGACAAT
TATCACTGGA TCCACATTCC GGTCGGCTAT CTCTATTGCA TCAACAATCC CCGCACCGAC
TGGTGCTTCA CCACGGCCGC GGAGGAAGGG CTCAACGGCC GGTCGCTCGG TTATCCTCGC
GGCAAGGTTC TCGGAGGCTG CTCCTCGATC AATGGAATGA TCTACATGCG CGGGCAGGCG
CGCGACTACG ACCTCTGGCG CCAGCTCGGC TGCGCCGGCT GGAGCTGGAA TGACGTGTTG
CCGCTCTTCA GGAAATGCGA GGACCACCAT CGCGGCGCCG ACGAAATGCA CGGCGCAGGC
GGCGAATGGC GGGTCGAGAA GGCGCGCGTC CGATGGGCCG TGCTCGACGC TTTCCAGAAG
GCCGCCACCG AAGCCGGCAT CCCCGAGACA GACGACTTCA ACCGCGGAAC CAACGAGGGT
TCGGGCTATT TCGACGTCAA CCAGCGGTCC GGCATCCGCT GGAACACGGC CAAGGCATTT
CTCAGGCCTG CGATGCGCCG ACGCAATCTC ACAATCCTCA CGAAAGCCCA TGTCCGCCGA
CTTGTTCTCA ATGATCGACG TGTCTCCGGC GTCGAGTTCC AGCATGACGG GGTCACCAAA
AGCGTGCTGG CCCGTCGAGA GGTGGTGCTT TCCGCCGGCG CAATCGGTTC TCCGCACATC
CTGGAACTCT CCGGCATCGG CCGACCCGAC GTGCTGCGCG AAAACGGCAT CGAGGTCCGC
CATGAGCTGC CCGCCGTCGG CGAGAACCTG CAGGACCATT TGCAATTGCG CCTCGCCTAC
AAGGTCACGG GCGTGCCTAC GCTCAACGAA AAAGCCACTT CGCTCTTCGG CAAGGCTGCG
ATCGGTCTCG AATATCTCGT CCGCCGCTCC GGCCCCATGG CAATGGCGCC GAGCCAGCTC
GGCATCTTCA CGCGCTCAGG TCCGGAAAAG GAAACGCCGG ATCTGCAGTA TCATGTACAG
CCGGTAACGC TCGAAAAGTT CGGTGAACCG GTGCATCCCT TCCCCGCAAT TACGGCAAGC
GTCTGCAATC TGAGGCCGGA AAGCCGTGGT TCGGTGCATC TGAAGAGCCC GGATTTCGCC
GCGGCGCCGA ATATCCGTCC GCGCTATCTC TCGGCCGAGG CCGACCGGGA GGTGGCCGTG
AAGGCGATCC GGCTCACCCG CCGCATCGTC TCGCAGCCCG CTTTCGCCCG CTACAAACCG
GTCGAGTTCA AGCCCGGCCC GAGCTACGAA ACGGATGAAG ACCTGAAGCG CGCCGCGGGC
GAGATCGGAA CGACGATCTT CCACCCGGTA GGCACCTGCC GCATGGGGGG CGACCAGGCG
AGCGTCGTCG ATCCGGAATT GCGGCTGCGC GGCCTCGCCG GCCTGCGGAT CGCCGACGCG
TCGATCATGC CGACCATCAC CTCGGGCAAC ACCAATTCGC CGACGATCAT GATCGCGGAA
AAGGCAGCCG AGATGATCCT GGCTGCAGAT CGCTAG
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| Protein sequence | MDTFDYIIVG AGSAGCVLAN RLSENPDRRV LLLEAGGSDN YHWIHIPVGY LYCINNPRTD
WCFTTAAEEG LNGRSLGYPR GKVLGGCSSI NGMIYMRGQA RDYDLWRQLG CAGWSWNDVL
PLFRKCEDHH RGADEMHGAG GEWRVEKARV RWAVLDAFQK AATEAGIPET DDFNRGTNEG
SGYFDVNQRS GIRWNTAKAF LRPAMRRRNL TILTKAHVRR LVLNDRRVSG VEFQHDGVTK
SVLARREVVL SAGAIGSPHI LELSGIGRPD VLRENGIEVR HELPAVGENL QDHLQLRLAY
KVTGVPTLNE KATSLFGKAA IGLEYLVRRS GPMAMAPSQL GIFTRSGPEK ETPDLQYHVQ
PVTLEKFGEP VHPFPAITAS VCNLRPESRG SVHLKSPDFA AAPNIRPRYL SAEADREVAV
KAIRLTRRIV SQPAFARYKP VEFKPGPSYE TDEDLKRAAG EIGTTIFHPV GTCRMGGDQA
SVVDPELRLR GLAGLRIADA SIMPTITSGN TNSPTIMIAE KAAEMILAAD R
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