| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2866 |
|---|
| Symbol | |
|---|
| ID | 5323742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2998808 |
|---|
| End bp | 2999509 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640791817 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001328531 |
|---|
| Protein GI | 150398064 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.699047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGC TTCTCAAGGT GGCTGGCCTC AACGCCTGGT ACGGCGAAAG CCATGTCCTG
CACGGCGTCG ACATGACCGT CGGCGAGGGA GAAATGGTCA CGCTGCTCGG CCGCAACGGC
GTCGGCAAGA CGACGACGCT GCGCGCGATC ATGGGAATCG TGCGCGAGCG CAAGGGCGAA
ATCAGCTTTG CCGGCGAGGA CCTGATGCGT GTGCCCCTTC ACCGCGTCGC CCGCCGTGGC
CTGGGCTACG TCCCGGAGGA GCGTGGCATC TTCTCGACGC TTTCCGTTTA TGAGAATCTT
GTGCTGCCGC CCGCGCTCGC TAAGGGCGGC ATGACGATCG ACGAGATTTT CGAGCTCTTT
CCCAATCTCC ACGAGCGCCG TAACAGCACC GGAACCAAGC TCTCCGGCGG CGAGCAGCAG
ATGCTGGCCA TTGCCCGCAT CCTGCGTACC GGGGTCAGGA TGATGCTGCT CGACGAGCCG
ACCGAAGGAC TCGCCCCCGT CATCGTCCAG CGTATCGGCG AGGTGCTGAA GAAGCTGAAG
GAAAGGGGCA TGACCGTTCT GCTGGTGGAA CAGAACTTCC GGTTCGCAAG CAAGGTCGCG
GACCGCTTCT ACCTGATGGA TCATGGGCGT GTCGCCGGCG AGTTCCCGGT CTCGGAGCTT
TCCGGGCGCA TGGAAATGCT GCATGATGTG CTCGGGGTGT AA
|
|---|
| Protein sequence | MKPLLKVAGL NAWYGESHVL HGVDMTVGEG EMVTLLGRNG VGKTTTLRAI MGIVRERKGE
ISFAGEDLMR VPLHRVARRG LGYVPEERGI FSTLSVYENL VLPPALAKGG MTIDEIFELF
PNLHERRNST GTKLSGGEQQ MLAIARILRT GVRMMLLDEP TEGLAPVIVQ RIGEVLKKLK
ERGMTVLLVE QNFRFASKVA DRFYLMDHGR VAGEFPVSEL SGRMEMLHDV LGV
|
|---|
| |