Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2864 |
Symbol | |
ID | 5323740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2996806 |
End bp | 2998011 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791815 |
Product | putative periplasmic binding ABC transporter protein |
Protein accession | YP_001328529 |
Protein GI | 150398062 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.581336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAAGA AACTGATCGC CACGCTGGCA ATGGTGCTCG CCAGCAGCAC GGCCGCCCTT GCCGACGCAT CCGACGGCAA GGTGAAGATC GGCATCCTCA ACGACCAATC CGGCGTCTAT GCCGATTTCG GCGGCAAATC GTCTTACGAG GCGGCGCTCA TGGCGGTCGA AGACTTCGGC GGCAAAGTGC TCGGCGTTCC TGTCGAGGTG GTTACGGCAG ACCACCAGAA CAAGCCGGAC ATCGCTTCGA ATATTGCTCG GCAATGGTAC GACACCGAAC AGGTGGACAG TATCATGGAG TTGACCACCT CCTCCGTTGC GCTCGCGGTC CAGGCGATCT CGAAGGAGAA GAAGAAGATC GACATCGTAA CCGGAGCGGC GACGACGGAG CTGACCGGCA AACAGTGCAG CCCCTATGGT TTTCACTGGG CCTATGACAC CCATTCGCTC GCAGTCGGCA CCGGCGGTGC GCTGGTCAAA CAGGGCGGAG ACAGCTGGTT CTTCCTGACC GCTGACTATG CCTTCGGCTA TTCGCTCGAG GAAAATACCG GCAACTACGT CAAGGAGAAC GGCGGTACCG TCGTCGGTGC CGTCCGCCAT CCGCTCGCCT CCACCGATTT CTCTTCCTTC CTCCTTCAGG CGCAGTCCTC GGGAGCCAAG GTGATCGGCC TTGCCAATGC CGGCCTTGAC ACCTCCAACG CCATCAAGCA GGCGGCCGAA TTCGGGATCG TTCAGGGCGG CCAGCGCCTC GCGGCTCTGC TCTTCACGCT TGCCGAAGTC CACGGCCTCG GCCTTGAAGC CGCGCAGGGG CTGACGTTGA CGGAGGGTTT CTACTGGAAC CGCGATGAGG AGAGCGCCAA GTTCGGCAAA CGCTTCATGG AGCGCACCGG CAAGATGCCG AACATGGTTC ATGCCGGCAC CTACTCGGCC GTGCTGCAAT ATTTGAAGGC GATCGAGAAG GCCGGCACCG ACGAAACCGA AGCAGTCGCC AAGGAACTTC ATGCGCTGCC GGTCGACGAC GTTTTCGCCA AGAACGGGAC GGTCGCACCG AACGGCCGGA TGGTCCACGA CATGTACCTG CTCGAGGTGA AGAAACCGGA CGAGAGCAAG GAGCCTTGGG ATTACTTCAA GGTGCTCGCG ACCATCCCCG GAAAGGAAGC CTTCATGGAT CCGGCCCAGA GCGGCTGCGA ACTCGTGAAG TCCTGA
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Protein sequence | MHKKLIATLA MVLASSTAAL ADASDGKVKI GILNDQSGVY ADFGGKSSYE AALMAVEDFG GKVLGVPVEV VTADHQNKPD IASNIARQWY DTEQVDSIME LTTSSVALAV QAISKEKKKI DIVTGAATTE LTGKQCSPYG FHWAYDTHSL AVGTGGALVK QGGDSWFFLT ADYAFGYSLE ENTGNYVKEN GGTVVGAVRH PLASTDFSSF LLQAQSSGAK VIGLANAGLD TSNAIKQAAE FGIVQGGQRL AALLFTLAEV HGLGLEAAQG LTLTEGFYWN RDEESAKFGK RFMERTGKMP NMVHAGTYSA VLQYLKAIEK AGTDETEAVA KELHALPVDD VFAKNGTVAP NGRMVHDMYL LEVKKPDESK EPWDYFKVLA TIPGKEAFMD PAQSGCELVK S
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