Gene Smed_2859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2859 
Symbol 
ID5323729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2986873 
End bp2987283 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content56% 
IMG OID640791804 
ProductPilT domain-containing protein 
Protein accessionYP_001328524 
Protein GI150398057 
COG category[S] Function unknown 
COG ID[COG3742] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.528221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGATCAT GTTCGATGGA GGGGGAGGCA TCTGCCTGTA TCGCAGCACT TCAAAAGAGT 
CGTTCACGTC TCATCTCGGC AGTGAACGAT GTCGAAACCG GCACTGTTAT GGCAGGTAGA
GTGAGGAGCG GGGACCGTTG CGAAGCGATT GCCGACCTGG ATGCTTTTCT TACCGTCTTC
CGCATCGACA TAGCCCCCGT CGATGATCGT ACGGCCCGCG CAGCGATGAA GGCCAGGATA
GATTACGGTC AGGGGTTTGG CACGCGTGGC GGATTGAACT TTGGGGATTG CTTCGCCTAC
GCGCTGGAAA AACAGCGTTC CGCTCCGTTG CTCTATGCCG GTAACGACTT TGGCATGACT
GATATTAACC CGGCATTGAA GGCTCCAAGC CTGAGGAGAA CGAAGAGGTA G
 
Protein sequence
MRSCSMEGEA SACIAALQKS RSRLISAVND VETGTVMAGR VRSGDRCEAI ADLDAFLTVF 
RIDIAPVDDR TARAAMKARI DYGQGFGTRG GLNFGDCFAY ALEKQRSAPL LYAGNDFGMT
DINPALKAPS LRRTKR