Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2859 |
Symbol | |
ID | 5323729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2986873 |
End bp | 2987283 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640791804 |
Product | PilT domain-containing protein |
Protein accession | YP_001328524 |
Protein GI | 150398057 |
COG category | [S] Function unknown |
COG ID | [COG3742] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.528221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGATCAT GTTCGATGGA GGGGGAGGCA TCTGCCTGTA TCGCAGCACT TCAAAAGAGT CGTTCACGTC TCATCTCGGC AGTGAACGAT GTCGAAACCG GCACTGTTAT GGCAGGTAGA GTGAGGAGCG GGGACCGTTG CGAAGCGATT GCCGACCTGG ATGCTTTTCT TACCGTCTTC CGCATCGACA TAGCCCCCGT CGATGATCGT ACGGCCCGCG CAGCGATGAA GGCCAGGATA GATTACGGTC AGGGGTTTGG CACGCGTGGC GGATTGAACT TTGGGGATTG CTTCGCCTAC GCGCTGGAAA AACAGCGTTC CGCTCCGTTG CTCTATGCCG GTAACGACTT TGGCATGACT GATATTAACC CGGCATTGAA GGCTCCAAGC CTGAGGAGAA CGAAGAGGTA G
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Protein sequence | MRSCSMEGEA SACIAALQKS RSRLISAVND VETGTVMAGR VRSGDRCEAI ADLDAFLTVF RIDIAPVDDR TARAAMKARI DYGQGFGTRG GLNFGDCFAY ALEKQRSAPL LYAGNDFGMT DINPALKAPS LRRTKR
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