Gene Smed_2841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2841 
Symbol 
ID5323711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2966343 
End bp2967386 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content55% 
IMG OID640791786 
Producthypothetical protein 
Protein accessionYP_001328506 
Protein GI150398039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.846065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCAAT TTCAGATCGT ATTAGACGGC GAGAGCCTTA TTACGCCCGC CGCAATCGCA 
ACCGAATTCA ATTCAAACAG AATCGAGTTT CACGAAGAAC ATCTGGCTAC AGGGAGAGCC
GAGATTGCGC TGATTCTGAA CATAGCGCAG CAACAGTTCG CAAACGGGCG CGAACCTTAC
GAAATAATAC ATAGATTAGC CGGCTCCCTT CATGAGACGC GCAACAAATA TCATCAAAGT
GTCTGGCAGA ATCTGATACC GATAATCCAG GGTCACGCCG TGTCGGAGTT CTTCCTCCAG
GATCCCTTTA CGCGGTGGTC TTTCGAAAAG CCGCGCGGTT ATTCAGGCGA TGCTCAATTG
CTCGACTTTA TCTATGGGCA TCACAGTATT GCTGGGGAAG TCGCCAAGGC CACGCCGCTT
GGGCGGGCGC TCTACGATTA CACCAAGGAC GCCTCGTCTT CGGTGGCTGT GCGGGAAAGA
CGCGATCTGC TGACAAGCCA TGTCGATGAC ATCGCGGCGA AACGGGGAGG GGAGGCGGAG
ATCCTGACGA TCGCTGCCGG GCACCTGCGT GAAGCCAACC GCTCGATAGC CTTGCAGGAG
CGCGGCTTGA AACGGTGGGT GGCCCTCGAT CAGGACCCGC TGAGCGTCGG TTCGATTGCG
CGCGACTTTG CAGGAAGCCG CGTTGAAGCT GTTGACGGAT CTGTCAGAAG CCTTCTCACA
AAGTCCCAGA AGCTTGGCCA GTTCGACTTC ATCTACGCGG CGGGGCTTTA CGACTATCTT
GCAGAAAAAG TGGCGGTGAA GCTCACCAGG AGATGCCTGG AAATGCTGAA GCCGAACGGC
GTCTTCCTCT TTGCAAATTT TGCGCGCGAC ATTCAGGTCG ACGGATACAT GGAGACCTTC
ATGAACTGGG CGCTGCTGCT GCGATCGGAA TTCGACATGT GGCAAATCAT TCATGCCAGC
GCGGACAGGC AGACCATCGA TGCGCGCGTC CAGTTCGGTG CGAACCGCAA CATCGTCTAC
GGCATTATCC AGAAGCGTTC ATGA
 
Protein sequence
MSQFQIVLDG ESLITPAAIA TEFNSNRIEF HEEHLATGRA EIALILNIAQ QQFANGREPY 
EIIHRLAGSL HETRNKYHQS VWQNLIPIIQ GHAVSEFFLQ DPFTRWSFEK PRGYSGDAQL
LDFIYGHHSI AGEVAKATPL GRALYDYTKD ASSSVAVRER RDLLTSHVDD IAAKRGGEAE
ILTIAAGHLR EANRSIALQE RGLKRWVALD QDPLSVGSIA RDFAGSRVEA VDGSVRSLLT
KSQKLGQFDF IYAAGLYDYL AEKVAVKLTR RCLEMLKPNG VFLFANFARD IQVDGYMETF
MNWALLLRSE FDMWQIIHAS ADRQTIDARV QFGANRNIVY GIIQKRS