| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2833 |
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| Symbol | |
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| ID | 5323703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2958275 |
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| End bp | 2959636 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791778 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_001328498 |
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| Protein GI | 150398031 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.385298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGGAGA AGGCGGAAAG GCAGCGGAAG GCGGCCCCGG ATCAGCAGCG CTCCGCCGGC
TACATGCCGG GATTTGGCAA CGACTTCGAG ACGGAGAGCC TGCCCGGATC GCTGCCGCAG
GGGCAGAACA GCCCGCAGAA GTGCAACTAC GGCCTCTATG CCGAACAGCT TTCCGGATCG
CCCTTCACTG CACCGCGCGG CACCAATGAG CGCTCGTGGC TCTACCGCAT CCGTCCAAGC
GTCCGGCATA CGGGGCGCTT CACGAAGATC GATTATCCGC ATTGGAAGAC GGCGCCGCAT
ACGCCAGAGC ATTCCCTGGC GCTCGGGCAA TTGCGCTGGA GCCCTTTGCC GGCCCCCTCG
CAGAGCCTGA CCTTTCTTCA GGGTATACGC ACCATGACGA CCGCGGGCGA CGCGCTGACG
CAGGTCGGCA TGGCCGCACA TGCCTATGCC TTCAATGCCG ATATGGTGGA CGACTATTTC
TTCAACGCCG ATGGCGAGCT GCTGATCGTT CCGGAAACGG GGGCATTCCA GGTCTTCACC
GAACTCGGCA GGATCGACGT GGAGCCGTCG GAAATCTGCC TCGTACCGCG GGGCATGATG
TTCAAGGTTA CACGCCTCGG CGATGAGAAG GTCTGGCGCG GCTATATCTG CGAGAATTAC
GGAGCGAAGT TCACGCTGCC GGACCGCGGA CCGATCGGCG CCAATTGCCT GGCCAATCCG
CGCGACTTCA AGACGCCGGT CGCCGCCTAC GAGGACAAGG AGACGCCCTG CCGCGTACAG
GTGAAATGGT GCGGCTCCTT TCATACGGCC GAGATCGCCC ACTCACCGCT CGATGTCGTC
GCCTGGCATG GCAATTATGC GCCCTACAAA TACGACCTCA AGACCTTCTC ACCTGTCGGT
GCGATCCTGT TCGATCATCC CGACCCGTCG ATCTTCACGG TGCTGACCGC GCCGTCCGGG
GAGGAAGGGA CGGCCAATGT CGACTTCGTC ATATTCCCGC CGCGCTGGCT GGTCGCCGAG
CATACGTTCC GCCCGCCCTG GTATCACCGC AACATCATGA GCGAGTTCAT GGGCCTTATC
CACGGGCGCT ACGATGCGAA GGAGGAGGGT TTCGTGCCGG GTGGCATGAG CCTGCACAAC
ATGATGCTGG CGCACGGTCC GGATTTTTCC GGCTTCGAAA AGGCGTCGAA CGGCGAACTG
AAGCCGGTAA AGCTCGACAA CACCATGGCC TTCATGTTCG AAACCCGTTT CCCCCAGCAG
CTGACGACGT TTGCCGCCGA GCTCGAGACG CTGCAGGACG ACTACATCGA TTGCTGGTCA
GGCCTCGAGC GCAAATTCGA CGGCACTCCC GGAATCAAGT GA
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| Protein sequence | MLEKAERQRK AAPDQQRSAG YMPGFGNDFE TESLPGSLPQ GQNSPQKCNY GLYAEQLSGS
PFTAPRGTNE RSWLYRIRPS VRHTGRFTKI DYPHWKTAPH TPEHSLALGQ LRWSPLPAPS
QSLTFLQGIR TMTTAGDALT QVGMAAHAYA FNADMVDDYF FNADGELLIV PETGAFQVFT
ELGRIDVEPS EICLVPRGMM FKVTRLGDEK VWRGYICENY GAKFTLPDRG PIGANCLANP
RDFKTPVAAY EDKETPCRVQ VKWCGSFHTA EIAHSPLDVV AWHGNYAPYK YDLKTFSPVG
AILFDHPDPS IFTVLTAPSG EEGTANVDFV IFPPRWLVAE HTFRPPWYHR NIMSEFMGLI
HGRYDAKEEG FVPGGMSLHN MMLAHGPDFS GFEKASNGEL KPVKLDNTMA FMFETRFPQQ
LTTFAAELET LQDDYIDCWS GLERKFDGTP GIK
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