| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2829 |
|---|
| Symbol | |
|---|
| ID | 5323699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2954038 |
|---|
| End bp | 2955432 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640791774 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_001328494 |
|---|
| Protein GI | 150398027 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAA TCTCCTGCAA ACTCCTGGTT CTTGGCGCCG GTCCCGGCGG CTATGTCACG
GCGATCCGCG CCGCCCAGCT CGGCGTCAAC ACCGTGATCG TCGAGAAGGC GAAGGCCGGC
GGCACCTGCC TGAATGTCGG CTGTATTCCA TCCAAGGCGC TGATCCATGC GGCGGAAGAA
TACGACAAGC TCCGCACGGC CGCATCGGGT AAGAGCCCGC TCGGCCTCTC CTTGAATGCT
CCCGCAATCG ACCTCGGCCG AACGATAGCC TGGAAGGACG GTATCGTCGG GCGGCTCAAC
AGCGGCGTCA CAGGGCTCCT GAAAAAGGCG GGCGTCAAGG CGGTTATCGG CGAGGGGCGT
TTCGTCGACG GCAAGACCGT GGATGTGGAA ACGGAGACGG GCCTCCAGCG CATTCGAGCG
GAAGCGCTCG TCATCGCGAC CGGTTCGGCG CCGATCGAGC TCCCCGACCT GCCCTTCGGC
GGAAATGTGA TTTCCTCGAC CCAGGCTTTG GCGCTGACGA AAATACCCGA AACGCTCGCG
GTCGTCGGTG GCGGCTATAT CGGCCTCGAA CTCGGCACCG CCTTTGCCAA GCTCGGTTCC
AAGGTCACCG TGCTCGAAGC GTTGGACAGA ATCCTGCCGC AATACGACGC CGATCTCTCG
AAGCCGGTGA TGAAGCGCCT CGGCGAACTC GGTGTGGAGG TCTTCACGGG CACCGCGGCA
AAGCGGCTCT CCGCCGATCG GCGCGGGCTC TTTGCCGAGG AAAACGGCCG CGCCTTCGAG
GTCCCGGCGG AGAAGGTCCT CGTCACCGTC GGTCGCGGGC CTGTCACCGA GGGCTGGGGA
CTTGAAGAGA TCGATCTCGA CCGGTCGGGC GGATTCATCC GCATCGACGA TCAGTGCCGC
ACTTCGATGC GCGGTATCTA TGCGATCGGC GACGTGACCG GCGAGCCGAT GCTTGCGCAC
CGCGCAATGG CACAGGGCGA AATGGTCGCG GAGATCGTCG CCGGTCGAAA GCGGAGCTGG
GACAAGCGCT GCATCCCGGC GGTTTGCTTC ACCGATCCGG AAATCGTCGG CGCCGGCCTC
TCGCCGGAAG AGGCTCGCAC GGCCGGCATC GATACCAGGA TCGGCCAGTT TCCTTTCCAG
GCGAACGGCC GTGCGATGAC AACGCTTTCC GAGGACGGCT TCGTCCGCGT GGTCGCCCGG
GCCGACAATC ACCTGGTCCT CGGCATCCAG GCGGTCGGCC ACGGCGTTTC GGAACTGTCG
GCGACCTTTG CGCTGGCGAT CGAAATGGGC GCGCGGCTGG AGGATATCGC CGGCACCGTC
CATGCGCATC CGACGCAGTC CGAGGCGTTT CAGGAGGCCG CCTTCAAGGC GCTGGGGCAC
GCGCTGCATA TCTGA
|
|---|
| Protein sequence | MKEISCKLLV LGAGPGGYVT AIRAAQLGVN TVIVEKAKAG GTCLNVGCIP SKALIHAAEE
YDKLRTAASG KSPLGLSLNA PAIDLGRTIA WKDGIVGRLN SGVTGLLKKA GVKAVIGEGR
FVDGKTVDVE TETGLQRIRA EALVIATGSA PIELPDLPFG GNVISSTQAL ALTKIPETLA
VVGGGYIGLE LGTAFAKLGS KVTVLEALDR ILPQYDADLS KPVMKRLGEL GVEVFTGTAA
KRLSADRRGL FAEENGRAFE VPAEKVLVTV GRGPVTEGWG LEEIDLDRSG GFIRIDDQCR
TSMRGIYAIG DVTGEPMLAH RAMAQGEMVA EIVAGRKRSW DKRCIPAVCF TDPEIVGAGL
SPEEARTAGI DTRIGQFPFQ ANGRAMTTLS EDGFVRVVAR ADNHLVLGIQ AVGHGVSELS
ATFALAIEMG ARLEDIAGTV HAHPTQSEAF QEAAFKALGH ALHI
|
|---|
| |