| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2817 |
|---|
| Symbol | cobH |
|---|
| ID | 5323687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2941707 |
|---|
| End bp | 2942339 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640791762 |
|---|
| Product | precorrin-8X methylmutase |
|---|
| Protein accession | YP_001328482 |
|---|
| Protein GI | 150398015 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2082] Precorrin isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.603033 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACT ACGATTACAT CCGCGATGGC AACGCCATCT ATGAGCGTTC TTTCGCGATC
ATCCGCGCAG AAGCTGATCT TTCCGGTTTC TCGGAGGAAG AGGCCGATCT TGCCGTTCGG
ATGGTGCATG CCTGCGGCTC CGTGGAGGCC GCGCGCCAAT TCGTCTTTTC GCCCGGGTTC
GTTTCCGCCG CGCGCGCTGC CTTGAAGGGC GGCGCCCCCA TCCTCTGCGA TGCGGAGATG
GTCGCCCGTG GCGTGACGCG CGCACGCCTC CCCGCCGGTA ATGAGGTCAT CTGCACGCTC
CGGGATCCGC AGACCGCAGA GATCGCGGCC GAGATCGGCA ATACGCGTTC GGCCGCGGCG
CTGAAGCTCT GGGGTGAAAG GATGGCCGGC TCCGTCGTAG CGATCGGTAA CGCGCCGACC
GCGCTCTTCT ATTTGTTGGA GATGCTGCGC GATGGTGCGC CGAAGCCAGC CGCGATCCTC
GGAATGCCGG TCGGCTTCGT CGGTGCGGCG GAATCGAAGG ATGCACTTGC CGAGAATTCC
TATGGCGTTC CCTTCGCGGT CGTGCGCGGC CGTCTCGGCG GCAGCGCGAT GACCGCTGCC
GCGTTGAATT CACTCGCGAG GCCGGGTCTG TGA
|
|---|
| Protein sequence | MPDYDYIRDG NAIYERSFAI IRAEADLSGF SEEEADLAVR MVHACGSVEA ARQFVFSPGF
VSAARAALKG GAPILCDAEM VARGVTRARL PAGNEVICTL RDPQTAEIAA EIGNTRSAAA
LKLWGERMAG SVVAIGNAPT ALFYLLEMLR DGAPKPAAIL GMPVGFVGAA ESKDALAENS
YGVPFAVVRG RLGGSAMTAA ALNSLARPGL
|
|---|
| |