Gene Smed_2815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2815 
Symbol 
ID5323685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2940176 
End bp2940940 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID640791760 
Productprecorrin-3B C17-methyltransferase 
Protein accessionYP_001328480 
Protein GI150398013 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1010] Precorrin-3B methylase 
TIGRFAM ID[TIGR01466] precorrin-3B C17-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.645388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGAA CGCTCTTCAT CGTCGGCACC GGGCCTGGCA ATCCGGCACA GATGACGCCC 
GAGGCCGAGA ATGCGATCGC TGCAGCGACC GAATTCTTCG GCTATGGCCC CTATCTCGAT
CGCCTGCAAC TTCGCGCGGA TCAACGGCGC ATAGCATCGG ACAACCGCGA GGAACTGGAC
CGCGCTCAGG CGGCACTCGC GCGCGCCGCG GCAGGGGTGA ATGTCTGCGT CGTCTCCGGC
GGCGACCCCG GCATCTTCGC CATGGCCGCC GCCGTCTGCG AGGCGATCGA CAACGGACCG
CAGGAATGGC GCGAAGTCGA TCTCACGATC ACGCCCGGCG TCACGGCAAT GCTCGCGGTC
GCCGCACGGA TCGGGGCGCC GCTGGGGCAC GATTTCTGTG TCATGTCGCT TTCCGACAAT
CTGAAGCCCT GGGAGGTCAT CACCCGCCGG CTCCAGCTTG CGGCCGAAGC GGGGCTGGTC
ATCGCGCTTT ACAATCCGAT CAGCAAGGCT CGCCCCTGGC AACTCGGCGA GGCTTTCGAG
GTTCTGCGGC AGGTGCTGCC GGCAACCGTG CCGGTGATCT TCGGCCACGC AGCCGGGCGG
CCCGACGAGC GCATCGAAGT GATGCCGCTC GGCGAGGCCG AGCCGGGTCG CGCTGACATG
GCGACCTGCG TGATCATCGG CTCGCCGGAG ACACGTACCA TCCTGCGCGA CGGGAAGCAT
GATCTCGTCT ACACGCCGCG GTCCTTTACC GGAGCAAAGC GTTGA
 
Protein sequence
MRGTLFIVGT GPGNPAQMTP EAENAIAAAT EFFGYGPYLD RLQLRADQRR IASDNREELD 
RAQAALARAA AGVNVCVVSG GDPGIFAMAA AVCEAIDNGP QEWREVDLTI TPGVTAMLAV
AARIGAPLGH DFCVMSLSDN LKPWEVITRR LQLAAEAGLV IALYNPISKA RPWQLGEAFE
VLRQVLPATV PVIFGHAAGR PDERIEVMPL GEAEPGRADM ATCVIIGSPE TRTILRDGKH
DLVYTPRSFT GAKR