Gene Smed_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2813 
Symbol 
ID5323683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2938202 
End bp2939443 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content67% 
IMG OID640791758 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 
Protein accessionYP_001328478 
Protein GI150398011 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.738025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACA TGTCGAACAA CGGTTCCACC ATCGTCGCTC CCTGGCTCAT CATAATCGGC 
ATCGGAGAGG ACGGTGTAGC CGGTCTCGGC GAAGAGGCCA AGCGCCTCAT CCAGGCGGCA
CCCGTCGTCT TCGGCGGCGC CCGGCACATG GAGCTTGCGT CTGCGCTGAT CAGGGGCGAG
CGCCAGATAT GGCAGAGTCC GTTTGAAAAA TCGGTAGAGG CCATCGTCGC CCGGCGCGGC
AGCCCCGTCG TGGTGCTCGC CTCGGGCGAT CCCTTCCTCT ACGGCATCGG CGCTACGCTC
ACGCGCCGCA TCGATGCCGC GGAAATGCGC ACCATCCCCG CTCCGTCCGC TTTCAGCCTT
GCCGCGTCCC GGCTAGGCTG GCCCTTGCAG GAGGTCACGA CCATTTCGCT GCACGGCCGC
CCGCTCGATC TCATAAGGCC GCATCTGCAG CCGGGGGCGC GCGTCCTGGC ATTGACCTCG
GATGAACACG GGCCGAAGGC GCTTGCCGGC CTGCTCTGTG AAAACGGCTT CGGTCAGTCA
CGACTTACGG TTCTAGAAGC GCTTGGCGGC AACAACGAAC ATGTCTCCAG TCATCGCGCC
GAGCGCTTTT CGCTCGAAGA CGTCCAAGCG CTGAACGTCT GCGCGGTGGA GGTAATCGCG
GGCACCGACG CTCGCGTGCT TCCGCTTGGC GGAGGGCTGG ACGACCTGTT GTTCGAGCAC
GACGGCCAGA TCACCAAAAG GGAGGTTCGG GCACTGACGC TCTCGGCGCT GGCGCCGCGC
CGGGGTGAAC TCCTCTGGGA TATCGGAGCC GGCTCCGGTT CGATCGCCAT CGAATGGATG
CTCGCCGACC CGGCGATGCG GGCGATCGCC ATAGAGGCTT CGCCGGAGCG GGTCGCGCGG
ATCGGCCGCA ATGCATTTCG CTTCGGTGTC CCGGGGCTTG TGGTTGTGGA AGGACGTGCG
CCGGAGGCGT TGCTGCAACT CCCGCGCCCG GATGTGATCT TCATCGGCGG CGGCGGAAGC
GAGCCCGGCG TGCTGGACGC GGCCATCGCA GCGCTCGTGC CCGGCGGACG GCTGGTCGCC
AATGCCGTGA CGACGGAAAT GGAAGCGGTG CTGCTCGCCC AGCATGCGCG GCTCGGCGGT
TCGCTGATCC GCATCGACAT CGCCCGAGCC TCGCCCGTCG GCACGATGAC GGGCTGGCGG
CCCGCCATGC CGGTCATGCA ATGGTCGTGG GTCAGGGCGT GA
 
Protein sequence
MADMSNNGST IVAPWLIIIG IGEDGVAGLG EEAKRLIQAA PVVFGGARHM ELASALIRGE 
RQIWQSPFEK SVEAIVARRG SPVVVLASGD PFLYGIGATL TRRIDAAEMR TIPAPSAFSL
AASRLGWPLQ EVTTISLHGR PLDLIRPHLQ PGARVLALTS DEHGPKALAG LLCENGFGQS
RLTVLEALGG NNEHVSSHRA ERFSLEDVQA LNVCAVEVIA GTDARVLPLG GGLDDLLFEH
DGQITKREVR ALTLSALAPR RGELLWDIGA GSGSIAIEWM LADPAMRAIA IEASPERVAR
IGRNAFRFGV PGLVVVEGRA PEALLQLPRP DVIFIGGGGS EPGVLDAAIA ALVPGGRLVA
NAVTTEMEAV LLAQHARLGG SLIRIDIARA SPVGTMTGWR PAMPVMQWSW VRA