| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2808 |
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| Symbol | |
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| ID | 5323678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2934621 |
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| End bp | 2936240 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791753 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_001328473 |
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| Protein GI | 150398006 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | [TIGR00944] Multicomponent K+:H+antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.333483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGATT GGCTCCATCA TCTTCTCATA TTGCCGATCC TCCTGCCGCT CGCCGTCGCC
GCGGTTCTGA TCCCGATCAA CGAGCGGGAC CGCACAGTGA AGGGCGCCAT AGGATTCGGT
TCAACGCTCG TCGTATTCAT CCTTTCGATG ATCCTCATGC GGTTTGCCGC TTCCGGAACC
GCCAGCCTGC CTGGATCGGG GGTTTACCAG CTCGGCAACT GGCCCGCCCC CTTTGGCATC
GTCCTCGTTC TGGATCGCCT GTCGGCTCTG ATGCTGTGCC TGACGAGTGG ACTTGCACTC
GCCGCGCAGG CCTATTCGAT GGCGCGCTGG CACACGGCGG GACATCACTT CCATTCGCTG
TTCCAGCTCC TCCTTGCAGG CCTCAACGGC GCCTTTCTCA CGGGCGACCT CTTCAATCTC
TTCGTCTTCT TCGAAATGAT GCTGGCCGCC TCCTACGGAC TGCTCCTGCA CGGCTCCGGA
CCTATACGCG TGAAGGCGGG CCTGCATTAT GTTGCGGTCA ATCTCGCCGC TTCGTCACTG
TTCCTGATCG GCGTCAGCCT GATCTACGGT ACGACCGGCA CCCTCAACAT GGCCGACCTC
GCAACGAAGA TCGCAGCGAT CGACGCCCAA GACAGAACAT TTGTCGAAAT GGGGGCAGCC
ATTCTCGGCG TCGCCTTCCT CGTTAAGGCC GGCATGTGGC CGCTCAGCTT CTGGCTGCCA
ACGGCCTACG CGGCGGCAAC GCCGCCGGTC GCCGGAATCT TCGCAATCCT GACCAAGGTC
GGCATCTATG TCATTATGCG CCTGCATCTG CTCGTCTTCG GCACGACAGC GGGCGCGTCG
TCCGGTTTCG GCCAGGACTG GCTGGTCACC GGGGGAATGC TGACGATCGC CTTCGGCGCC
ATAGGCGTGC TCGCCTCGCA GGCAATGGGT CGCCTTGCCG GCTACTCCGT TCTGGTATCC
TCCGGGACGC TGCTCGCGGC GATCGGCCTT GGCCACGGCG GAATGCTCGC CGGTGCTCTC
TTCTATCTGG TCAGCTCGAC GCTGACGATC GCGGCCTTTT TCCTGCTGAT CGAGCTCGTC
GAGCGCGGTC GGGACGCCGG CGCCGACGTC CTCGCTGTGA CGATGGAAGC TTATGGCGAT
TTCGACGAAG ACGAAGAAGA GGAAGAGGTC GGCGTTGCCA TTCCGGGTAC CATGGCCGTT
CTCGGTCTCT GCTTCTGCCT CTGCGCATTG CTGCTCGCCG GCCTGCCGCC TTTCTCGGGT
TTCATCGCCA AGTTTGCGCT CATAAGCGGC CTATTCGATG CGCCGGCCGC CGATCTTGCC
GCAGCAACCT CCGTCGCGGA CTGGATCTAT GTCGCCCTCC TCATCCTGTC AGGGCTCGCC
GCCATGATCG CAATGAACCG GATCGGCATC CGCACTTTCT GGGCATCGAT CGAGGGGACG
ATACCGCGGG TTGTCGTGAT CGAGATCACA CCCGTGATTG TCCTGCTTGC CGCCTGCATC
TTCCTGAGCC TGCAGGCGGG CCCCGCGATG CGCTACATGC AGGCGACGGC CGACGATCTG
CTCGCTCCGC TCACCTTGAG CGATCGGGTG CTTTCGGCGC CGCGAGCCGG GAGCAATTAG
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| Protein sequence | MTDWLHHLLI LPILLPLAVA AVLIPINERD RTVKGAIGFG STLVVFILSM ILMRFAASGT
ASLPGSGVYQ LGNWPAPFGI VLVLDRLSAL MLCLTSGLAL AAQAYSMARW HTAGHHFHSL
FQLLLAGLNG AFLTGDLFNL FVFFEMMLAA SYGLLLHGSG PIRVKAGLHY VAVNLAASSL
FLIGVSLIYG TTGTLNMADL ATKIAAIDAQ DRTFVEMGAA ILGVAFLVKA GMWPLSFWLP
TAYAAATPPV AGIFAILTKV GIYVIMRLHL LVFGTTAGAS SGFGQDWLVT GGMLTIAFGA
IGVLASQAMG RLAGYSVLVS SGTLLAAIGL GHGGMLAGAL FYLVSSTLTI AAFFLLIELV
ERGRDAGADV LAVTMEAYGD FDEDEEEEEV GVAIPGTMAV LGLCFCLCAL LLAGLPPFSG
FIAKFALISG LFDAPAADLA AATSVADWIY VALLILSGLA AMIAMNRIGI RTFWASIEGT
IPRVVVIEIT PVIVLLAACI FLSLQAGPAM RYMQATADDL LAPLTLSDRV LSAPRAGSN
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