| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2795 |
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| Symbol | |
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| ID | 5323665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2916292 |
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| End bp | 2917500 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791740 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001328460 |
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| Protein GI | 150397993 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.758551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTC CCAGCTCATC CAGCGCTGCC CGTGTCCGTC CCGTCGGCGA CGATTTCGAA
GTCGTGGACG ATCAGAAGGC CGAGGCCAAG AGCCCCTCGA CCGACGCCGC TACCGATGAG
CAGGCGGGCG AGCAGATCGC TACACCTCCT AAAAAACGTC GCAAGATCCT TCCGGTTCTG
GGCATCGTGC TCCTCGGTGC CGCCGCCTGG TACGGCTATG ATTGGTGGAC CAATGGGCGC
TTCCTGGTCT CGACCGACGA CGCGTACATA GAAGGCGACA TTGCGACGAT CTCGCCGAAG
GTTTCCGGCT ATATTGCCAA GGTCGACGTC GTCGCCAACC AGCATGTGAA GGCCGGCGAC
CCGCTCGTCA CGCTCGACGA CGGCGATTAC CGCATCGCGG CGGAGCAGGC GGAGGCGCAG
ATCGCCACAC AGAAGCTGGC GCTCAGCCGT TTCGACGCAC AGATCGCCGG GGCGAAGGCG
AGCCTTACTC AAACCGAAGC GCAGAAGAAG GCGCTCGAGG CGACGGTGCG CGGCGCGGAA
CTGGCACAGA GGCGCGCCAG CGAACTGCAG TCGAAGTCAT TCGGTACGGA TGCTTCTCTC
GACAGCGCCC AGGTGGCGCT CGATCAAGCC CGTGCAAATC TCGCCGGCGC CGAGGCCAAT
ATCGCGGCTG CCAAGGCCAA CATCACCGTG CTCGAGGCCC AGCGCAACGA GGCTGAAAGC
ACGATCCATT CGCTGGAGCT TGCCCGCGAC AAGGCAAGTC GCGATCTGGG CTTCACCGTG
CTCAAGGCAC CCTATGACGG CGTGATAGGC AACGTCGCGG TCCAGGTCGG CGATCTCGTT
TCGGCAGGCC AGCGGCTCGC CGCGCTCGTG CCCACCGATC AGCTCTATAT CGACGCCAAC
TTCAAGGAGA CGCAGATCGC GCATCTGGTG CCGGGTTCCA AGGTTGAGAT CCATGTGGAC
GCCTATGAGG ATCGCCCGAT CGAAGGCACC GTGGCATCGA TCTCGCCGGC CTCCGGCTCG
GTCTTCTCGC TGCTGCCCGC CGAAAACGCG ACGGGCAACT TCACCAAGGT CATCCAGCGC
GTTCCGGTGC GCATTACCTT GCCGGCCGAC GTGCTGGCCG AGGGACATCT GCGCGCGGGT
CTGAGCGTAG TCGTAGACGT CGATACACGC ACTGCACCGG AACAGTCGAA GCTCGCTCAG
GCGAAGTAA
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| Protein sequence | MSAPSSSSAA RVRPVGDDFE VVDDQKAEAK SPSTDAATDE QAGEQIATPP KKRRKILPVL
GIVLLGAAAW YGYDWWTNGR FLVSTDDAYI EGDIATISPK VSGYIAKVDV VANQHVKAGD
PLVTLDDGDY RIAAEQAEAQ IATQKLALSR FDAQIAGAKA SLTQTEAQKK ALEATVRGAE
LAQRRASELQ SKSFGTDASL DSAQVALDQA RANLAGAEAN IAAAKANITV LEAQRNEAES
TIHSLELARD KASRDLGFTV LKAPYDGVIG NVAVQVGDLV SAGQRLAALV PTDQLYIDAN
FKETQIAHLV PGSKVEIHVD AYEDRPIEGT VASISPASGS VFSLLPAENA TGNFTKVIQR
VPVRITLPAD VLAEGHLRAG LSVVVDVDTR TAPEQSKLAQ AK
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