| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2789 |
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| Symbol | |
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| ID | 5323659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2908274 |
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| End bp | 2909584 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791734 |
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| Product | xylose isomerase |
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| Protein accession | YP_001328454 |
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| Protein GI | 150397987 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACAG GATTTTTCGG CGATACCGCT AAGATCAAAT ATGAAGGTCC GGAAAGCACC
AATCCGCTCG CCTTCCGCCA TTACAACCCG GACGATGTCG TCCTCGGCAA GCGTATGGAA
GACCATCTGC GCTTCGCCGT CGCCTATTGG CATAGCTTCG TCTGGCCGGG CGGCGATCCC
TTCGGCGGGC AGACCTTCGA GCGGCCCTGG TTCAAGGACT CGATGGAGGC CGCGAAGCTG
AAGGCGGACG TGGCCTTCGA ATTCTTCCAA TTGCTGGGCG CGCCATTCTA CTGCTTCCAC
GACGCGGACG TTCGCCCCGA GGGGCGGAAT TTTGCCGAGA ACACGCGCAA CCTCAACGAC
ATCGTCGATT ATTTCGCAAA GAAGCAGGAC GAGTCCGGCG TCAAGTTGCT GTGGGGCACG
GCCAACCTTT TTTCGAACCG CCGCTTCATG GCGGGGGCTG CGACGAACCC GGACCCGGAT
GTTTTCGCCT TCGCCGCGGC GACGGTTAAG ACCTGCATCG ACGCGACGCA GCGGCTCGGC
GGCGAGAATT ACGTGCTCTG GGGCGGGCGC GAGGGCTATG AGACCCTGCT CAACACCGAC
CTGAAGCGCG AGCTCGATCA GCTTGGCCGC TTTCTCAATC TGGTCGTCGA ATACAAGCAC
AAGATCGGCT TCAAGGGTAC GATCCTGATC GAGCCGAAGC CGCAGGAGCC GACCAAGCAC
CAGTACGACT ACGATGTCGC GACCGTCTAC GGCTTCCTCA AGAAATATGG TCTCGAGAAT
GAGGTTAAGC TCAATATCGA GCAGGGCCAT GCGATCCTCG CCGGCCATTC CTTCGAGCAC
GAGCTGGCGC TTGCCAATGC CCTCGGTGTC TTCGGTTCGA TCGACATGAA CCGCAACGAT
TACCAGTCCG GATGGGATAC CGACCAGTTC CCGAACAATG TTCCGGAAAT GGCGCTCGCT
TATTACCACG TCCTTGCGGG TGGCGGCTTC AAGACCGGTG GAACCAATTT CGACGCGAAG
CTGCGCCGCC AGTCGATCGA CCCCGAAGAC CTGCTGATCG GCCATATCGG CGGGATGGAT
TGCTGCGCGC GCGGCCTCAA GGCCGCAGCG AAGATGATTG AGGACAAGGC ACTCTCGGCG
CCGCTCGAAG AGCGTTATGC CGGCTGGAAC GAGCTGGAGG CGCAAAAGAT GCTCCAGGGC
GGCTTCTCGC TCGAGGAGAT CGAGGCTCGG GTTCTGAAGG CGGACGTAAA TCCGCAGCCG
AAATCCGGGC GGCAGGAGCT CCTGGAAAAC GTGGTCAACC GCTACGTCTG A
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| Protein sequence | MSTGFFGDTA KIKYEGPEST NPLAFRHYNP DDVVLGKRME DHLRFAVAYW HSFVWPGGDP
FGGQTFERPW FKDSMEAAKL KADVAFEFFQ LLGAPFYCFH DADVRPEGRN FAENTRNLND
IVDYFAKKQD ESGVKLLWGT ANLFSNRRFM AGAATNPDPD VFAFAAATVK TCIDATQRLG
GENYVLWGGR EGYETLLNTD LKRELDQLGR FLNLVVEYKH KIGFKGTILI EPKPQEPTKH
QYDYDVATVY GFLKKYGLEN EVKLNIEQGH AILAGHSFEH ELALANALGV FGSIDMNRND
YQSGWDTDQF PNNVPEMALA YYHVLAGGGF KTGGTNFDAK LRRQSIDPED LLIGHIGGMD
CCARGLKAAA KMIEDKALSA PLEERYAGWN ELEAQKMLQG GFSLEEIEAR VLKADVNPQP
KSGRQELLEN VVNRYV
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