Gene Smed_2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2784 
Symbol 
ID5323654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2901931 
End bp2902596 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID640791729 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001328449 
Protein GI150397982 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCTG ATCTTCTTCT GCTCATCGCG AAGGCGACGC TGGACACGCT GCGCATGGTG 
GCGATCGCCG GCCTCGTCGG CTCGCTGATC GGTCTGCCCA TCGGCATTTT CCTCGCGACC
AGCGGCAGGG GCGAACTCTT TCCCGCACCC AATCTCAACC GGGCCGTGGG GCTGGTGGTG
AACGCGACGC GCTCGACGCC CTTCATCATT CTTGTCGTTG CGATCATTCC GTTGACGCGC
CTCATTACCG GTACGTCCAT CGGCACCAAG GCGGCGATCG TGCCCCTGAC GATCGCGACC
ATTCCGTTTT TTGCCCGCCT TGTCGAGGCG GCGATCCGCG ACATCGACAA GGGGCTCATC
GAGGCCGCGC GCGCAATGGG CGCGACCCCG ATGCAGATCG TCTTCAAGGT CCTGCTTGCA
GAAGCGCGGC CGGCGCTGAC GCTGGCGCTC ACCATGACGA TCGTCAGTCT CATCGGCTAT
TCGGCGATGG TTGGTGCCGT CGGCGGCGGC GGTCTCGGCG ATCTCGGTAT CCGTTACGGA
TACCAGCGCT TCATGCCGGA TGTGATGCTC GTCGTCGTCG TCGTGCTGAT CGTGCTCGTA
CAGCTCGTAC AGAGCGCCGG CGACCGCCTG GCGCGCCGCT TCGACAAGCG CAACCGCAAA
ACCTGA
 
Protein sequence
MSPDLLLLIA KATLDTLRMV AIAGLVGSLI GLPIGIFLAT SGRGELFPAP NLNRAVGLVV 
NATRSTPFII LVVAIIPLTR LITGTSIGTK AAIVPLTIAT IPFFARLVEA AIRDIDKGLI
EAARAMGATP MQIVFKVLLA EARPALTLAL TMTIVSLIGY SAMVGAVGGG GLGDLGIRYG
YQRFMPDVML VVVVVLIVLV QLVQSAGDRL ARRFDKRNRK T