| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2783 |
|---|
| Symbol | |
|---|
| ID | 5323653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2901116 |
|---|
| End bp | 2901892 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640791728 |
|---|
| Product | YaeC family lipoprotein |
|---|
| Protein accession | YP_001328448 |
|---|
| Protein GI | 150397981 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TCATTCTCGC GGCGGCTCTT GCCGCGCTCA CCGCCGGCAC GGCACTCGCA
GAGACGATCA AGGTCGGCGT AACCCCGGGC GAGCACGCCG AGATCATGGA GAAGGTGAAG
GAAGTCGCCG CTCCGAAGGG CCTCGACATC GAGATACTCG AATTCTCCGA CTACGTCGTT
CCGAACCAGG CGCTGGCCGA CGGCGACCTC AATGCCAATT CTTTCCAGCA TCAGCCCTAT
CTCGACAACC AGATCGCCGA CCGGGGCTTC GACATCGTCA GCGTTGGCCT GACCATCACC
ACGCCCATGG GTGTCTATTC GAATAAGGTG AAGAGCCTCG ATGAACTGGA GGACGGCGCA
ACGGTCGCTA TTCCCAACGA TCCGACCAAT GGCGGTCGCG CTCTCCTTGT TCTCGCGTCG
AAGGGCCTGA TCAAGGTCAA TGCGGATGTC GGGCTGAAGG TCACGCCGGC CGACGTGACG
GAAAATCCTA AGAACATCCA GTTTGCCGAG CTCGATGCGG CTCAACTGCC ACGCTCGCTG
GCCGATGTCG ACGCAGCCGT GATCAACACC AACTACGCAC TCGAGGCTGA CCTTCACCCC
AAGGAGGACG CGATTGCCAT CGAGAGCGAC AAGTCTCCCT ACGCCAACGT CATCGCTGTG
CGTGCAGCGG ACAAGGACGC GCCCTGGGTG AAGACGCTGG TCGAAGCCTA CCATGACGAG
AAGATCAAGA CCTTCATCGT CGAGCACTTC AAGGGCGCGC TCATACCGAG CTGGTGA
|
|---|
| Protein sequence | MKKLILAAAL AALTAGTALA ETIKVGVTPG EHAEIMEKVK EVAAPKGLDI EILEFSDYVV
PNQALADGDL NANSFQHQPY LDNQIADRGF DIVSVGLTIT TPMGVYSNKV KSLDELEDGA
TVAIPNDPTN GGRALLVLAS KGLIKVNADV GLKVTPADVT ENPKNIQFAE LDAAQLPRSL
ADVDAAVINT NYALEADLHP KEDAIAIESD KSPYANVIAV RAADKDAPWV KTLVEAYHDE
KIKTFIVEHF KGALIPSW
|
|---|
| |