Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2762 |
Symbol | |
ID | 5323632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2882653 |
End bp | 2883408 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640791707 |
Product | peptidase C26 |
Protein accession | YP_001328427 |
Protein GI | 150397960 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.126803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAC CTGTCGTTGC CATTCCTTGC GACTTCCGCG AATTCGACGG CAATGTCTGG CATGTTGCTG CCCACCAATA TGTCCGCGCT GCAGTTGAGG GCGCTGGCCT GATGGTGTTC CTCGTTCCGG CTCTGGAGAC CGGCAACGAC GTCGACGAGA TCCTCGACCG CGTCGACGGC GTGCTGGCAA GCGGCGCGCG CTCCAACGTC CACCCTTCGC TCTATGGCAG GGAGGCGGCT GAAACAGACG GGCCTTTCGA TCCGGGTCGC GATGCGACCA GCCTCCCGCT GATCCGCCGC GCCATCGATC GGGGTATCCC TCTGTTTGCG ATCTGCCGCG GGATACAGGA ACTGAACGTC GCGCTAGGCG GCACGCTCGC AACGGAAATC CAGGAGCAGG CCGGCGTCTG GGACCATCGG AAGCCCGACG TGCCGGAGCT CGACCTTGCC TATGGCATTC GCCAGGACGT GGTGGTCAAC GAAGGAAGCT GCCTCGCACC CGTCCTCGGT ACAGGCCGCA TAAGAGTCAA TTCGCTGCAC CGGCAGGCAA TCGCCGCTGC CGCGCCGCGC CTTGCGGTCG AAGCCCTTGC CGACGACGGG ACGATCGAGG CCGTCTCGGT CATCGGCGCC AAGGCCTTCG CCATCGGCGT TCAGTGGCAT CCCGAATACT GGGTACGCAC CGACGCCCCA TCAGCCGCCC TCTTCAGGGC CTTCGGCGAT GCCGCACGCG CCTATCGTGA GAGCAAGGCC CGTTAA
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Protein sequence | MSKPVVAIPC DFREFDGNVW HVAAHQYVRA AVEGAGLMVF LVPALETGND VDEILDRVDG VLASGARSNV HPSLYGREAA ETDGPFDPGR DATSLPLIRR AIDRGIPLFA ICRGIQELNV ALGGTLATEI QEQAGVWDHR KPDVPELDLA YGIRQDVVVN EGSCLAPVLG TGRIRVNSLH RQAIAAAAPR LAVEALADDG TIEAVSVIGA KAFAIGVQWH PEYWVRTDAP SAALFRAFGD AARAYRESKA R
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