Gene Smed_2762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2762 
Symbol 
ID5323632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2882653 
End bp2883408 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content65% 
IMG OID640791707 
Productpeptidase C26 
Protein accessionYP_001328427 
Protein GI150397960 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.126803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAC CTGTCGTTGC CATTCCTTGC GACTTCCGCG AATTCGACGG CAATGTCTGG 
CATGTTGCTG CCCACCAATA TGTCCGCGCT GCAGTTGAGG GCGCTGGCCT GATGGTGTTC
CTCGTTCCGG CTCTGGAGAC CGGCAACGAC GTCGACGAGA TCCTCGACCG CGTCGACGGC
GTGCTGGCAA GCGGCGCGCG CTCCAACGTC CACCCTTCGC TCTATGGCAG GGAGGCGGCT
GAAACAGACG GGCCTTTCGA TCCGGGTCGC GATGCGACCA GCCTCCCGCT GATCCGCCGC
GCCATCGATC GGGGTATCCC TCTGTTTGCG ATCTGCCGCG GGATACAGGA ACTGAACGTC
GCGCTAGGCG GCACGCTCGC AACGGAAATC CAGGAGCAGG CCGGCGTCTG GGACCATCGG
AAGCCCGACG TGCCGGAGCT CGACCTTGCC TATGGCATTC GCCAGGACGT GGTGGTCAAC
GAAGGAAGCT GCCTCGCACC CGTCCTCGGT ACAGGCCGCA TAAGAGTCAA TTCGCTGCAC
CGGCAGGCAA TCGCCGCTGC CGCGCCGCGC CTTGCGGTCG AAGCCCTTGC CGACGACGGG
ACGATCGAGG CCGTCTCGGT CATCGGCGCC AAGGCCTTCG CCATCGGCGT TCAGTGGCAT
CCCGAATACT GGGTACGCAC CGACGCCCCA TCAGCCGCCC TCTTCAGGGC CTTCGGCGAT
GCCGCACGCG CCTATCGTGA GAGCAAGGCC CGTTAA
 
Protein sequence
MSKPVVAIPC DFREFDGNVW HVAAHQYVRA AVEGAGLMVF LVPALETGND VDEILDRVDG 
VLASGARSNV HPSLYGREAA ETDGPFDPGR DATSLPLIRR AIDRGIPLFA ICRGIQELNV
ALGGTLATEI QEQAGVWDHR KPDVPELDLA YGIRQDVVVN EGSCLAPVLG TGRIRVNSLH
RQAIAAAAPR LAVEALADDG TIEAVSVIGA KAFAIGVQWH PEYWVRTDAP SAALFRAFGD
AARAYRESKA R