| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2754 |
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| Symbol | |
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| ID | 5323624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2873062 |
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| End bp | 2873949 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791699 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001328419 |
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| Protein GI | 150397952 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACACTTG CTGCCATGAC TGCGGACGTC TCCGGCCTTG CCACCGAGGA GGCGAACCGC
CGCCGCCAGC GCAAGCCGAA GCTTGCCGCC TTTTTCGTAC TCGGCTCGGC CCTGCTCGTT
GCAGGTTGCC AGACCGACAA GCCCGAATCG ATGTTTCGCG TCGAACGCGC GCAAGGCTCG
GAAGGCAACA TCGCCTCGCT CTCGAGCGTC ATCGCCTCTA ACCCCGGCGA TCCCGAGGGC
TACAACGTGC GCGGCTCGGC CTACGGGCGC GCTGGCGAGT TCCGCCGCGC GGTCGCCGAT
TTCGATCAGG CGATCCAGCT CAATCCACGC TTCTATCAGG CCTATGCCAA CAGGGCTCTG
GTCCAGCGAA ACCTGGGCAA CCAGCAGGCT GCACTCGCGG ATTACAACGC GGCGCTGCAG
ATAAATCCGA ACTACGACGT CGCCTATATC GGCCGTGGGA ATCTGTACCG CCAGGCCAAC
CAGCTCGACG CCGCCTTCAA CGATTTCAAC AAGGCGATCG AACTCGACAC GGCCGACCCC
CGCGCCTATC ACAATCGCGG CCTGATCTAT CAGGCACGGA ATCAGCACGT GCAGGCGATC
GAGGATTTCT CCAAGGCGAT TTCGCTCTCG CCGAGTTCCC CCGAGCCCTA TAACGGCCGC
GGCATATCCT ATGTAGCGCA GGGCGATGAC GACAACGCCT TCTCCGACTT CAATACGGCC
ATCAACCTCA ACGGCAAGCT GGCCGAATCA TGGGCAAACC AGGCGCTGGT CTACGAACGG
CGCGGCGATA AGGCCAAGGC GGCGAAGTCC TATTCGCACG CCTTGTCGCT GGATCCCAAA
TACGAGCCGG CTCGTGCCGG CCTTGCCCGC GCCAAGGCGA TGTCCTGA
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| Protein sequence | MTLAAMTADV SGLATEEANR RRQRKPKLAA FFVLGSALLV AGCQTDKPES MFRVERAQGS
EGNIASLSSV IASNPGDPEG YNVRGSAYGR AGEFRRAVAD FDQAIQLNPR FYQAYANRAL
VQRNLGNQQA ALADYNAALQ INPNYDVAYI GRGNLYRQAN QLDAAFNDFN KAIELDTADP
RAYHNRGLIY QARNQHVQAI EDFSKAISLS PSSPEPYNGR GISYVAQGDD DNAFSDFNTA
INLNGKLAES WANQALVYER RGDKAKAAKS YSHALSLDPK YEPARAGLAR AKAMS
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