| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2752 |
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| Symbol | |
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| ID | 5323622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2871093 |
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| End bp | 2872346 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791697 |
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| Product | sarcosine oxidase beta subunit family protein |
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| Protein accession | YP_001328417 |
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| Protein GI | 150397950 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAT ATTCTGTTTT TGCCGTGGCG CGCGAAGCGC TGCGCGGGCA CAAGGGTTGG
GGCCCGCACT GGGCCTCGCC GGAGCCGCGC AAGCAATATG ACGCAATCAT CATCGGGGGT
GGCGGCCATG GCCTCGGCGC GGCCTACTAT CTTGCCAAAG AGCATGGCAT AACCAATGTC
GCCGTGCTCG AGAAAGGCTG GATCGGCGGC GGCAACACCG GCCGAAACAC GACGATCATC
CGGTCCAACT ATCTCTATGA AGAGAGCATG GACATCTACG AGCATTCGCT GAAGCTCTGG
GAGAACCTGT CGCAGGACCT GAATTACAAC GTGATGTACT CGCCGCGCGG CGTGATGATG
CTTTCGCACA ACATCCACGA CCAGCAGTCC TTCAAGCGGC ATATCAATGC CAACCGGCTC
TACGGCATCG ATAATGAGTG GCTGACGCCG GAACAGGCGA AGGCCTACTG CCCGCCGCTC
GATATCTCGA AGACCGCCCG ATATCCGATC AACGGCGCGG CACTGCAGCG CCGCGGCGGT
ACGGCGCGCC ACGACGCGGT TGCCTGGGGC TATGCCCGCG CTGCGTCGGA CCGTGGCGTC
CACATCATCC AGAACTGCGA AGTGACCGGC ATCAGGCGCG ACGAAACCGG GCATGTGACC
GGCGTCGACA CCAATCGCGG TTTCATCGGT GCGAAGAAGG TCGGCATCTC GGCTGCGGGC
CACTCGTCGG TTCTGATGCA GATGGCGGAT GTGCGCGTCC CGCTGCAGAG CCAACCGCTG
CAGGCGCTCG TTTCCGAGCC CTTGAAGCCC ATCTTCCCCT GCGTCGTCAT GTCGAACTCC
GTGCATGCGT ATATTTCGCA GTCCGATAAG GGCGAGTTCG TTATCGGCGC CGGCACCGAC
CAATATAACT CCTACTCGCA GACCGGCGGG CTGCAGATCA TCACGCATAC ATTGGATGCG
ATCTGTGAGC TCTTCCCGAT GTTTCGTCGC GTCAAGATGA TGCGGCAATG GGGCGGCATC
GTCGATGTCA CTCAGGATCG TTCGCCGATT CAAGGCGTGA CGCCGGTGCC CGGCCTTTAT
CTCAATGCCG GATGGGGAAC GGGCGGTTTC AAGGCGACGC CGGGTTCGGC CAATCTCTTC
GCTCATCTCA TCGCGCGCGG GGAGCCGCAC CGGCTGGCCG CGGGGCTTAC CCTCGAGCGC
TTTCGCACCG GGCGGCTCAT CGACGAGGCG GCGGCTGCCG CCGTTGCCCA TTAA
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| Protein sequence | MRKYSVFAVA REALRGHKGW GPHWASPEPR KQYDAIIIGG GGHGLGAAYY LAKEHGITNV
AVLEKGWIGG GNTGRNTTII RSNYLYEESM DIYEHSLKLW ENLSQDLNYN VMYSPRGVMM
LSHNIHDQQS FKRHINANRL YGIDNEWLTP EQAKAYCPPL DISKTARYPI NGAALQRRGG
TARHDAVAWG YARAASDRGV HIIQNCEVTG IRRDETGHVT GVDTNRGFIG AKKVGISAAG
HSSVLMQMAD VRVPLQSQPL QALVSEPLKP IFPCVVMSNS VHAYISQSDK GEFVIGAGTD
QYNSYSQTGG LQIITHTLDA ICELFPMFRR VKMMRQWGGI VDVTQDRSPI QGVTPVPGLY
LNAGWGTGGF KATPGSANLF AHLIARGEPH RLAAGLTLER FRTGRLIDEA AAAAVAH
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