| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2730 |
|---|
| Symbol | |
|---|
| ID | 5323600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2842057 |
|---|
| End bp | 2842581 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640791675 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001328395 |
|---|
| Protein GI | 150397928 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGC GCGTTGAACG GAGACTGGAG CCTCATTATG CGCGGCTATT CGCCTATGCC
GTGGCGTTGT CACGTGATCG CGACGGAGCG CAGGATATCT TCCAGGAGTG CATCGCCCGT
GCGCTCGATG CGCGAAGTGT ACCCGAAGCG GAGCCTGCAT TTCGCGCATG GCTGTTCTCC
ATCCTGCGGA ACATTTGGAT CGATCAGTCG CGCTCGCGCC GCCGCCGGTC CGACCTGGAG
CAGGAGTTCG TCACGGATCT CGTGCCCGCG CCGGTCGCGC CGGAAGCCGT GCTGGTCGAT
GCATTTTCCG TGCGTCAGGC ATTTACCCGG CTCAGCACCG AACATCGGGA GATTCTCGCG
CTGGTCGACA TATCCGGTTT CAGCTACGAG GAGGTGGCGA CGATGATCGC CGTGCCCAAG
GGTACGGTCA TGAGCCGGGT CAGCCGTGCT AGGCGGGCTC TGGCCGCTCA CCTCGGCGAG
ACCAATGTCG TCGACCTTGC CCGGCAACGA GAAAGCCGCA AATGA
|
|---|
| Protein sequence | MRLRVERRLE PHYARLFAYA VALSRDRDGA QDIFQECIAR ALDARSVPEA EPAFRAWLFS
ILRNIWIDQS RSRRRRSDLE QEFVTDLVPA PVAPEAVLVD AFSVRQAFTR LSTEHREILA
LVDISGFSYE EVATMIAVPK GTVMSRVSRA RRALAAHLGE TNVVDLARQR ESRK
|
|---|
| |