Gene Smed_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2720 
Symbol 
ID5323590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2834218 
End bp2834457 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content60% 
IMG OID640791665 
ProductHicB family protein 
Protein accessionYP_001328385 
Protein GI150397918 
COG category[S] Function unknown 
COG ID[COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.261901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATGCCG ATACGGTCAC CGGGCTGAAG GAAGCCTTTC ACGAGGCTGT GGACGATTAC 
ATCGAAACCT GCGCCACGCT CGGGAAAGAA CCTCAGAAGC CCTATTCCGG CGAGATGATG
TTCCGTGTCG ACCCCGCCTT CCACCGAAAG GCCGCCATCG CCGCCGCGCT TTCCGGTAAG
AGCCTCACCC AGTGGGCTGA GGAGGCGCTT GATAGGCAGC CAGCAATTAC GCGGGTCTAG
 
Protein sequence
MNADTVTGLK EAFHEAVDDY IETCATLGKE PQKPYSGEMM FRVDPAFHRK AAIAAALSGK 
SLTQWAEEAL DRQPAITRV