Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2711 |
Symbol | |
ID | 5323580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2821036 |
End bp | 2825760 |
Gene Length | 4725 bp |
Protein Length | 1574 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791655 |
Product | glutamate synthase (ferredoxin) |
Protein accession | YP_001328376 |
Protein GI | 150397909 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGGTC ATTCGCCATC ACGACAGATT GGGCTCAACC TCGCACAAGA CGCTGCGACG GTTGTGAAAA CGCCCGCATT CTCCTCCGGA CTGCCGCGAA AACAGGGGCT CTACGATCCG CGGAACGAGC ATGATGCCTG CGGCGTCGGC TTCGTCGCGC ATCTCAAGGG TGAGAAGTCG CATCAGATCG TGCGCGACGG CCTCTTCATG CTCGAAAACC TGACCCACCG CGGCGCGGTC GGTGCCGATC CGCTGATGGG CGACGGCGCC GGCATTCTCG TCCAGATCCC GGACCGCTTT TTTCGCGAGG AGATGGCGAA GCAGGGCGTT ACGCTGCCGA AGGCTGGCGA ATATGCCGTC GGCTATCTCT TCATGCCGCG CGACGAGAAG CTTATCGCCC ACTTCAAGGA CGTGATCAGC GAAGTCGTGG CCGAGGAAGG CCAGATTTTG CTCGGCTACC GTGACGTGCC CGTCGACAAT TCGTCGCTGT CCAAGGCGCC GGACATCGCC GCGACCGAGC CGCATCATGT CCAGGTGTTT ATCGGCGCCG GCCGCGAGGC AGCCACGAAA GACGAATTCG AGCGGCGGCT GTTCACGCTC CGCAAGGTGA TCTCCAACCG CATCTATGCG GAGGCGGACG GGGACGATCT CGGTTTCTAT ATCGTGTCGC TGTCGACGTC GACCATCGTC TACAAGGGCA TGTTCCTCGC CTACCAGGTC GGCGCCTATT ACAAGGACCT CGCCGACGAA CGCTTCCAGT CGGCGGTTGC GCTCGTACAC CAGCGTTTCT CGACCAACAC CTTCCCGTCC TGGAAGCTCG CGCATCCCTA CCGCATGGTC GCGCATAATG GCGAGATTAA CACGCTGCGC GGCAACGTTA ACTGGATGGC GGCACGGCAG GCATCCGTTT CCTCGCCGCT TTTCGGCGAT GACATATCCA AGCTCTGGCC GATCTCCTAT GAGGGCCAGT CGGACACGGC CTGTTTCGAC AATGCGCTCG AGTTCCTCGT GCGCGGCGGC TATTCGCTCT CGCATGCCGT GATGATGCTG ATTCCCGAAG CCTGGGCCGG CAACCAGCTC ATGTCGCAGG AGCGCAAGGC CTTTTACGAG TATCACGCGG CGCTGATGGA GCCGTGGGAC GGGCCTGCGG CGGTCGCCTT CACCGACGGC CGCCAGATCG GCGCGACGCT CGACCGCAAC GGCCTGCGCC CGGCGCGCTA TATCGTCACC AGCGACGACC GCGTCATCAT GGCGTCGGAG GCCGGCGTAC TGCCCGTCGC CGAGGAAAAG ATCGTCAAGA AGTGGCGGCT TCAGCCCGGC AAGATGCTTC TGATCGACAT GGAAGAGGGC CGAATCATTT CCGACGAGGA AGTGAAGTCG TCGCTCGCCG GCAAGCATCC CTACCGCCAC TGGCTCGACA ATACCCAGCT CATCCTCGAA GAGCTGAAGC CGGTCGAACC GCGGGCGTTG CGCCGCGACG TCTCGTTGAT CGACCGGCAG CAGGCCTTCG GCTACACGCA TGAAGACACG AAGCTCCTGA TGTCGCCCAT GGCGACGACC GGTCAGGAGG CAATCGGCTC GATGGGAACG GACACGCCCA TCTCGGCAAT GTCCGACAAG CCGAAGCTGC TGTACACCTA TTTCAAGCAG AACTTCGCCC AGGTCACCAA CCCGCCGATC GACCCGATTC GCGAGGAACT GGTGATGAGC CTCGTCTCCT TCATCGGCCC GCGCCCGAAC ATCCTCGATC ATGAGGGCAT GGCACATGCC AAGCGGCTCG AGGTCCGCCA GCCGATCCTT ACCAATGGCG ACCTGGAGAA GATCCGTTCG ATCGGTCACA CCGAGGAACG TTTCGACACC AAGACGCTCG ACTTCACCTA CGACATTACC CGCGGTGCCG AAGGCATGCC GGAGATGCTC GATCGTCTCT GCGAAAGGGC GGAAGCGGCA GTCAAGGGCG GCTACAACAT CATCGTGCTT TCGGACCGGC AGATCGGCCC GGACCGCGTC GCCATTCCGG CGCTGCTTGC CACCGCGGCC GTTCACCACC ACCTGATCCG CAAGGGCCTG CGTACGTCGG TCGGCCTCGT CGTCGAATCG GGCGAACCGC GCGAGATACA CCATTTCTGC CTGCTTGCCG GCTACGGTGC GGAGGCGATC AATCCCTATC TCGCCTTCGA CACGCTCGTC GACATGCACA AGCGCGGCGA GTTTCCGAAA GAAGTCGACG AAAAGGAAGT CGTCTACCGC TATATCAAGG CGGTCGGCAA AGGCATCCTC AAGGTCATGT CCAAGATGGG CATCTCGACT TATCAATCCT ATTGCGGCGC GCAGATCTTC GACGCCGTCG GCCTTTCCTC CGAACTGGTC GACAAATACT TCTTCGGTAC GGCGACGACG ATCGAAGGCA TCGGCCTCGA GGAGATCGCC GCTGAGACGG TCGCTCGCCA CAAAGCCGCC TTCGGAAGCG ACCCGGTGCT TGCCAACACG CTCGATATCG GCGGCGAATA TGCCTACCGC ATGCGCGGCG AAAGCCACGC CTGGACTCCG GATGCCATCG CCTCGCTCCA GCATGCGGTG CGCGGCAATG CCGAGGACCG CTATCGCGAG TTCTCCGCCA TGATGAACGA GCAGGCGAGC CGCATGAACA CGATCCGCGG GCTCTTCACG ATCAGGGACG CCGAGGCAGC CGGCCGCAAG CCGATCCCTG TCGAGGAGGT CGAGCCGGCG TCGGAGATCG TCAAGCGCTT CTCGACGGGA GCGATGTCCT TCGGCTCGAT CAGCCGCGAG GCGCACACGA CGCTGGCGAT CGCCATGAAC CGGATCGGCG GCAAGTCGAA CACTGGCGAA GGTGGTGAGG AGAGCGATCG CTATCTGCCG CTGCCGGACG GTTCGACGAA CCCGGAGCGA TCGGCGATCA AGCAGATTGC CTCGGGCCGC TTCGGCGTCA CGACGGAATA TCTGGTCAAT GCCGACATGC TGCAGATCAA GGTGGCGCAG GGTGCAAAAC CCGGCGAAGG CGGCCAGTTG CCGGGTCACA AGGTGGACGC GACCGTCGCT AAGACGCGGC ATTCCACGCC GGGGGTCGGC CTGATCTCGC CGCCGCCGCA CCATGACATC TATTCGATCG AGGATCTGGC GCAGCTGATC TATGATCTGA AGAACGTCAA TCCCGAGGCT GACGTCTCGG TCAAGCTGGT TTCGGAAGTC GGCGTCGGTA CGGTTGCGGC CGGCGTCGCC AAGGCGCGCG CCGATCACAT CACCATTGCC GGTTTCGACG GCGGCACCGG TGCTTCGCCG CTGACCTCGC TGAAGCATGC GGGCAGCCCC TGGGAGATCG GCCTTGCCGA AACGCAGCAA ACCCTGGTGC TCAACGGTCT TCGCTCCCGC ATCGCTCTGC AGGTCGACGG AGGTCTGAAG ACCGGCCGCG ACGTCGTCAT CGGGGCACTG CTCGGCGCCG ACGAATTCGG CTTCGCCACC GCGCCGCTGA TCGCGGCCGG CTGCATCATG ATGCGCAAGT GCCATCTGAA CACCTGTCCT GTCGGCGTCG CCACACAGGA TCCGGTGTTG AGGAAGCGTT TCAAGGGCAC GCCCGAGCAT GTCGTCAACT ACTTCTTCTT CGTTGCCGAG GAAGTGCGCG AACTCCTCGC ATCGCTCGGT GCAAGAAAGC TTGACGAGAT TATCGGTGCC TCGGACCTGC TCGAACGCGA CCGGATGATC GAGCACTGGA AGGCGAGTGG CCTCGACTTT TCGAAGATCT TCCACAAGGT GGAGGCTCCG AAGGAAGCAA CCTATTGGAC CGAACGTCAG AACCATCCCA TTCAGGATAT TCTCGACCGC AAACTGATCG AGAAGGCGAA ACTGGCGCTG GAGACCAAGG TGCCGGTCGC CTTCGAGGCC GAGATCAAGA ATGTCGACCG CTCGGCCGGC GCGATGCTTT CGGGCGCCCT TGCCAAGCGT TGGGGCCACA AGGGGCTGAA GGACGATACG ATCCACGTGA CCCTCAAGGG CACTGCGGGC CAATCCTTCG GCGCGTTCCT CGCCCGCGGC ATCACCTTCG ACCTCGTTGG TGACGGCAAC GACTATGTCG GCAAGGGGCT CTCGGGCGGA CGCATCGTCG TTCGGCCGCC GCAGAACGCG CGGATCGTGC CGCATCAGTC GATCATCGTC GGCAACACCG TGCTTTATGG CGCGATTTCC GGCGAGTGCT ACTTCAACGG CGTGGCCGGC GAACGCTTCG CGGTGCGAAA CTCTGGTGCC ATCGCGGTCG TGGAAGGCGT CGGCGATCAC GGCTGCGAAT ATATGACCGG AGGCGTCGTC GTCGTTCTCG GCGGCACCGG CCGCAACTTC GCGGCCGGCA TGTCGGGAGG GGTTGCTTAC GTGCTCGACG AGGAGGGCGA TTTCGCCCGG CGCTGCAACA TGGCGATGGT CGAGCTGCAG CCGGTTCCGG AGGAGGACGA CATGCTGGAG AAGCTGCATC ACCACGGCGG TGACCTCATG CACAAGGGCA TGGTCGACGT CTCGGGCGAC ATGACGCGGC ATGACGAGGA GCGGCTCTAC CAGCTCATCT CGAACCACCT CCACCATACC GGCTCTGCGC GCGCCAAGGA GATTCTCGAC CACTGGACGG ACTACCGGCC GAAGTTCCGC AAGGTTATGC CGGTCGAGTA CCGCCGCGCG CTCGAGGACA TGGAGCGCAT GAAAATGGCG GAAGCGGCCG AGTAA
|
Protein sequence | MTGHSPSRQI GLNLAQDAAT VVKTPAFSSG LPRKQGLYDP RNEHDACGVG FVAHLKGEKS HQIVRDGLFM LENLTHRGAV GADPLMGDGA GILVQIPDRF FREEMAKQGV TLPKAGEYAV GYLFMPRDEK LIAHFKDVIS EVVAEEGQIL LGYRDVPVDN SSLSKAPDIA ATEPHHVQVF IGAGREAATK DEFERRLFTL RKVISNRIYA EADGDDLGFY IVSLSTSTIV YKGMFLAYQV GAYYKDLADE RFQSAVALVH QRFSTNTFPS WKLAHPYRMV AHNGEINTLR GNVNWMAARQ ASVSSPLFGD DISKLWPISY EGQSDTACFD NALEFLVRGG YSLSHAVMML IPEAWAGNQL MSQERKAFYE YHAALMEPWD GPAAVAFTDG RQIGATLDRN GLRPARYIVT SDDRVIMASE AGVLPVAEEK IVKKWRLQPG KMLLIDMEEG RIISDEEVKS SLAGKHPYRH WLDNTQLILE ELKPVEPRAL RRDVSLIDRQ QAFGYTHEDT KLLMSPMATT GQEAIGSMGT DTPISAMSDK PKLLYTYFKQ NFAQVTNPPI DPIREELVMS LVSFIGPRPN ILDHEGMAHA KRLEVRQPIL TNGDLEKIRS IGHTEERFDT KTLDFTYDIT RGAEGMPEML DRLCERAEAA VKGGYNIIVL SDRQIGPDRV AIPALLATAA VHHHLIRKGL RTSVGLVVES GEPREIHHFC LLAGYGAEAI NPYLAFDTLV DMHKRGEFPK EVDEKEVVYR YIKAVGKGIL KVMSKMGIST YQSYCGAQIF DAVGLSSELV DKYFFGTATT IEGIGLEEIA AETVARHKAA FGSDPVLANT LDIGGEYAYR MRGESHAWTP DAIASLQHAV RGNAEDRYRE FSAMMNEQAS RMNTIRGLFT IRDAEAAGRK PIPVEEVEPA SEIVKRFSTG AMSFGSISRE AHTTLAIAMN RIGGKSNTGE GGEESDRYLP LPDGSTNPER SAIKQIASGR FGVTTEYLVN ADMLQIKVAQ GAKPGEGGQL PGHKVDATVA KTRHSTPGVG LISPPPHHDI YSIEDLAQLI YDLKNVNPEA DVSVKLVSEV GVGTVAAGVA KARADHITIA GFDGGTGASP LTSLKHAGSP WEIGLAETQQ TLVLNGLRSR IALQVDGGLK TGRDVVIGAL LGADEFGFAT APLIAAGCIM MRKCHLNTCP VGVATQDPVL RKRFKGTPEH VVNYFFFVAE EVRELLASLG ARKLDEIIGA SDLLERDRMI EHWKASGLDF SKIFHKVEAP KEATYWTERQ NHPIQDILDR KLIEKAKLAL ETKVPVAFEA EIKNVDRSAG AMLSGALAKR WGHKGLKDDT IHVTLKGTAG QSFGAFLARG ITFDLVGDGN DYVGKGLSGG RIVVRPPQNA RIVPHQSIIV GNTVLYGAIS GECYFNGVAG ERFAVRNSGA IAVVEGVGDH GCEYMTGGVV VVLGGTGRNF AAGMSGGVAY VLDEEGDFAR RCNMAMVELQ PVPEEDDMLE KLHHHGGDLM HKGMVDVSGD MTRHDEERLY QLISNHLHHT GSARAKEILD HWTDYRPKFR KVMPVEYRRA LEDMERMKMA EAAE
|
| |