| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2710 |
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| Symbol | gltD |
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| ID | 5323579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2819477 |
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| End bp | 2820934 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791654 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001328375 |
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| Protein GI | 150397908 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.405041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGG TTACTGGGTT TTTGGAGATC GACCGGCAGG TAGCAAAGTA CCAACCGGCA
TCTGACCGCA TCCGCCATTT CCGTGAATTC ACAATTCCGA TGTCCGATCA GGAAGTGCAG
AAGCAATCCG CTCGCTGTAT GGACTGCGGC ATTCCCTATT GCCACGGCCC GACCGGGTGC
CCGGTGCACA ACCAGATCCC GGATTGGAAC GATCTCGTCT ATAACGGCAA CTGGGACGAG
GCGATCCGCA ATCTGCATTC GACCAACAAC TTCCCGGAAT TCACCGGCAG AGTCTGCCCG
GCGCCTTGCG AGGAAGCCTG CACGCTGAAC CTCGAAGACG TGCCGGTTGC GATCAAGACG
GTCGAGCAGG CGATTGCCGA TAAGGCCTAC GAGATGGGCT ATATCGTGCC CCAACCGGCC
GTGACCAAGA CCGGCAAGAA GGTCGCCGTC ATCGGGTCCG GACCGGCCGG CATGGCGGCT
GCCCAGCAGC TGGCGCGCGC AGGCCACGAG GTGCATGTCT ACGAACGAGA GTCCAAGCCT
GGCGGGCTGC TGCGTTACGG CATCCCGGAT TTCAAAATGG AGAAGAACTT CATCGACCGC
CGTGTCGACC AGATGCGGGG CGAAGGCGTG ACGTTCCATT GCGGCGTCAA TGTCGGCGTG
GAGGTGGCCA TGCAGAAGCT CGTTGATGAA AACGACGCCG TGGTTTACTG CGGCGGCTCC
GAGACACCGC GCGACGCTGG CATTCCAGGC GTGGAGTTCG TCGGCGTGCA CGACGCCATG
CCTTATCTGG TGCAGCAGAA CCGCCGGATC GGCCGCGAAA ATATCGACAG CGTGGGCTGG
CCGTCCGAGC CGATCCTGGC CGGCGGCAAG CACGTCGTCG TGGTCGGCGG CGGAGACACG
GCATCCGACT GCGTCGGAAC CGCCTTCCGC CAGGGCGCCG TCAAGGTGAC GCAGCTCGAC
ATTCGTCCGC AGCCGCCGGA AAAGGAGGAC AAGCTCGCCG TCTGGCCCTT CTGGGCGACG
AAGATGCGCA CCTCCTCCAG TCAGGCCGAG GGTGCGGTTC GCGAGTTCCA GGTTGCGACG
CTCGAATTCG TCGGCGACGA GGACGGCAAC CTGACCGGGG TCAAATGCTG TCAGGTCGAC
GAGCGTCGCA AGCCGATCGC CGGTACCGAG TTCATCATCA AGGCCGATCT TGCCTTCATC
GCGATCGGTT TCCGTGGCCC CTTCGCAGAT AGCGTGCTCA AGGACCTCGG CGACAAGCTG
ACGCTCAACA CCGACCGGCG CGGTTCGACC AATGTCGTTG CCGATGATCG CGACTACAGG
ACTTCGGTCG ACAAGCTGTG GGCGGCGGGC GACATTCGCC GCGGCCAGTC TCTTGTCGTC
TGGGCGATCC GCGAAGGCCG GCAGGCGGCA CGCGCGATCG ACGAGGCGTT GATGGGCTCG
ACGGTGCTGC CGCGGTAG
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| Protein sequence | MGKVTGFLEI DRQVAKYQPA SDRIRHFREF TIPMSDQEVQ KQSARCMDCG IPYCHGPTGC
PVHNQIPDWN DLVYNGNWDE AIRNLHSTNN FPEFTGRVCP APCEEACTLN LEDVPVAIKT
VEQAIADKAY EMGYIVPQPA VTKTGKKVAV IGSGPAGMAA AQQLARAGHE VHVYERESKP
GGLLRYGIPD FKMEKNFIDR RVDQMRGEGV TFHCGVNVGV EVAMQKLVDE NDAVVYCGGS
ETPRDAGIPG VEFVGVHDAM PYLVQQNRRI GRENIDSVGW PSEPILAGGK HVVVVGGGDT
ASDCVGTAFR QGAVKVTQLD IRPQPPEKED KLAVWPFWAT KMRTSSSQAE GAVREFQVAT
LEFVGDEDGN LTGVKCCQVD ERRKPIAGTE FIIKADLAFI AIGFRGPFAD SVLKDLGDKL
TLNTDRRGST NVVADDRDYR TSVDKLWAAG DIRRGQSLVV WAIREGRQAA RAIDEALMGS
TVLPR
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