Gene Smed_2707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2707 
Symbol 
ID5323576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2815524 
End bp2816411 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content61% 
IMG OID640791651 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_001328372 
Protein GI150397905 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.206675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA AGCGTAAAGT CCGCAAAGCC GTTTTCCCCG TCGCAGGCCT CGGGACGCGT 
TTCCTTCCCG CGACCAAGGC GGTCCCGAAG GAGATGCTGA CGGTGGTGGA CAAGCCGGTC
ATCCAATATG TTGTCGATGA AGCGCTGGAA GCCGGAATCG AGCATCTGAT TTTCGTGACC
GGCCGGAGCA AGGCCGTCAT CGAGGATTAT TTCGACATTC AGGTCGAATT GGACCAGACG
CTGCGCGAGC GCAACAAGAA GGCGGAGATC GAGCTCCTCG AAGCCATGCT GCCGAAGGCC
GGCACCACGA GCTTCACCCG CCAGCAGGCG CCGCTTGGCC TCGGACATGC GGTCTGGTGC
GCCCGCGAGC TCGTCGGCAA CGAGCCCTTC GCGCTGCTCT TGCCCGACAT GATCATGAAG
GGAGAGAAGG GCTGCCTGAA GGGAATGGTC GAACTCTATG AAGAGAGCGG CGGCAACGTC
GTCGCCGTCG AGGAATGCGC GCCCGACCAG GCGCACAAAT ACGGGATCGT CGGAGTGGGC
GAGACCGTCG GCGACGGCTT CAGGATCACC AGGATGGTCG AGAAGCCGGC AAAGGGGACG
GCTCCGTCGA ATTTCTTCAT CAACGGCCGC TATATCCTGC AGCCGGAGAT TTTCCCGATT
CTGGAAACGC AGGAACGCGG CGCCGGCAAT GAGATCCAGT TGACCGACGG CATGGTGAAG
CTCGCAGAAG CACAGGCCTT TGCCGCCTAT CACTTCCGCG GCGATACCTA TGATTGCGGC
GCCAAGGACG GTTTCATTCT GGCCAATGTC GCCTTCGCTC TCGAGCGCGG CGACATCCGC
CCCACGGTCG AGGGACCGCT CAAGACGCTG CTTCAGGGCC TGAAGTGA
 
Protein sequence
MTDKRKVRKA VFPVAGLGTR FLPATKAVPK EMLTVVDKPV IQYVVDEALE AGIEHLIFVT 
GRSKAVIEDY FDIQVELDQT LRERNKKAEI ELLEAMLPKA GTTSFTRQQA PLGLGHAVWC
ARELVGNEPF ALLLPDMIMK GEKGCLKGMV ELYEESGGNV VAVEECAPDQ AHKYGIVGVG
ETVGDGFRIT RMVEKPAKGT APSNFFINGR YILQPEIFPI LETQERGAGN EIQLTDGMVK
LAEAQAFAAY HFRGDTYDCG AKDGFILANV AFALERGDIR PTVEGPLKTL LQGLK