Gene Smed_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2706 
Symbol 
ID5323575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2814057 
End bp2815460 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content65% 
IMG OID640791650 
Producthypothetical protein 
Protein accessionYP_001328371 
Protein GI150397904 
COG category[S] Function unknown 
COG ID[COG5338] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.390646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCCA ATATCTCACG CTCGACGATG TCGGGCGCCT TGCGTGTGAA GTCGCCAGCA 
TGGCTGCTTG CGGGCTGCGC CTTCCTTACC TGTGCACCAG CGAGCGCGCA AAGCCTCGCC
CCTGCAGACC AGCCGATTCC CGCCATCATC GACCCGCAGG CGACCGGCGC CGTTGCCGGC
ACCGATCTGT CGCCGGCCCT CGACGAGGAC TTCAACCGCC TCAACCGGCG CGAGGAAACG
ATCGACAGGC TGCGCAGGCG CATCGATCCG GATGACGGTC AGGCACCCGG CATTCGCATC
GGGACCTTCG TTCTGAAGCC GGCGCTCAGC GAGACATTCA ACCACGAACG GCAGAAGAAC
GGCGGCAGCA GCGAAAGCCG GAGTTTCATG GAGACCGGGC TCAAGGGGTC GCTCACCTCC
GACTGGTCCC GCCACCAGCT GAGCGTGACC GGCGAAGGCG TGATCCAGGA CAATATATCC
GGAGAAGGCG AAGAAGAGCC GCGTGCCGAC GTCAATGCCG AACTGCGCCT GGACCTTGGA
GAGGAAACCA CGGCCAGGCT GAGAGCAGGT TACAGCTTCG AACGCGAGGA CGCGAACGAT
CCGAACGCCA TTGCCGATGC CGAAACCCAA TCCGGCGTCG ATACCTATCG CCTCGGCGCC
GCGATCGAGC GCGACCTCGG TCTCATTCGC GGCGCGGTCG GCGTGGACTT CGAGCGCAGG
ACCTACGGCA ATGTCGACCT TGACGATGGC AGGACGCTTT CCCAGGAGGA TCGCGACCGC
AACCTCGCAA CGCTGACCGC GCGGATAGGC TACGAGCTTT CGCCAGCGCT GATCCCCTTT
CTCGAGGCCT CCGCTGGCAA GTCGGTCTAT GACCTGCGCC GGGATACGTT CGGCTTCGAG
CGTTCCTACG AGAGCTATGC CGGCCGGGCC GGCATGGAGG TGGATTTCGG CGAGAAGCTC
AACGGGGAAC TGGCGCTCGG TTACGAGACC TTTCGCTTCG ACGATCGACG TCTCGAGGAC
TTGGGCGGCG TTTCGCTCGA CGGCCGCGTC AACTGGTCGC CTCACCGCGG GACCGACGTT
CTGTTCGGCA TGCTGACCTA TGTCGATCCG TCGACTACAC CCGGCGAGGC GGGATCGATC
AACTACGAGC TGACCAATGT GGTCACGCAG CAGCTGCGTT CGACGCTCGT CGGGCGGCTT
TCGAACAGCG TCACCTGGCG CGATTTCCCT TCCGACGCCA CGGCCTCGGA CGAGACCGCC
TGGCGAGCCG GCGCCGGACT CACCTGGGAC ATGAGCCGCT ATCTCGCGCT CACCGGAGAC
CTCAGCTACG AGCGCACGAA CAGGGATCAG GGCGCATCGA GCGACACCAC GCGCGTCGGC
GTCGGCCTGA CGCTGCGGCG ATGA
 
Protein sequence
MVPNISRSTM SGALRVKSPA WLLAGCAFLT CAPASAQSLA PADQPIPAII DPQATGAVAG 
TDLSPALDED FNRLNRREET IDRLRRRIDP DDGQAPGIRI GTFVLKPALS ETFNHERQKN
GGSSESRSFM ETGLKGSLTS DWSRHQLSVT GEGVIQDNIS GEGEEEPRAD VNAELRLDLG
EETTARLRAG YSFEREDAND PNAIADAETQ SGVDTYRLGA AIERDLGLIR GAVGVDFERR
TYGNVDLDDG RTLSQEDRDR NLATLTARIG YELSPALIPF LEASAGKSVY DLRRDTFGFE
RSYESYAGRA GMEVDFGEKL NGELALGYET FRFDDRRLED LGGVSLDGRV NWSPHRGTDV
LFGMLTYVDP STTPGEAGSI NYELTNVVTQ QLRSTLVGRL SNSVTWRDFP SDATASDETA
WRAGAGLTWD MSRYLALTGD LSYERTNRDQ GASSDTTRVG VGLTLRR