Gene Smed_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2704 
Symbol 
ID5323573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2812499 
End bp2813497 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content61% 
IMG OID640791648 
Productband 7 protein 
Protein accessionYP_001328369 
Protein GI150397902 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGCA TGGACATCGC AGTCGTTGCA TTCGTGGTTG TCGTGATTCT CGTGCTCTTC 
GCCGGGATCA AGACCGTGCC GCAGGGCTAC CGCTATACGG TCGAACGCTT CGGGCGTTAC
ACACGGACGA TGGAACCGGG ACTGAATCTC ATCATTCCCT TCATCGATCG TATCGGGTCG
AAGTTGAGCG TGATGGAGCA GGTGCTCGAT GTTCCGACGC AGGAGGTCAT CACCAAGGAC
AATGCAAGCG TATCCGCGGA TGCGGTCGCC TTCTATCAGG TTCTGAATGC CGCGCAGGCG
GCCTATCAGG TCGCCGACCT GGAAAACGCA CTCCTCAACC TGACGATGAC CAATATTCGT
TCCGTCATGG GATCGATGGA TCTTGACGAG CTGCTGTCGA ACCGTGACAC GATCAATGAT
CGATTGCTCC ACGTCGTGGA TGAGGCCGCC AATCCCTGGG GCATCAAAAT TACCCGCATC
GAGATCAAGG ACATCGCACC GCCGAAGGAC CTGGTCGACG CTATGGCCCG GCAGATGAAG
GCCGAACGCG AGAAGCGCGC GCAGGTGCTC GAGGCAGAGG GCTCCCGAAA TGCGCAGATC
CTGCGTGCCG AAGGTGCGAA GCAATCGGCG ATCCTTCAAG CCGAGGGTCA ACGCGAGGCA
GCCTATCGCG AGGCGGAGGC GCGCGAACGT CTGGCGGAGG CGGAGGCCAA GGCGACCCGG
ATGGTCTCCG AGGCGATCGC CGCCGGCGAC GTGCAGGCGA TCAACTATTT CGTCGCGCAA
AAATACACCG AGGCCCTGGC CGCGATCGGA ACGGCGAACA ACCAGAAAAT CGTGCTGATG
CCGATGGAAG CCTCGTCGCT CATCGGTTCT CTCGGCGGAA TAGGCGCGAT TGCGCGGGAA
GTTTTCGGGG ACGCCGCGGC GGCGTCCCAG CGTCAACGGC AGTCCACGCC CAGAACCGGC
CCCTCCCTTC CCCTGGAAAA GCCGGAGGAT CGCTCATGA
 
Protein sequence
MGGMDIAVVA FVVVVILVLF AGIKTVPQGY RYTVERFGRY TRTMEPGLNL IIPFIDRIGS 
KLSVMEQVLD VPTQEVITKD NASVSADAVA FYQVLNAAQA AYQVADLENA LLNLTMTNIR
SVMGSMDLDE LLSNRDTIND RLLHVVDEAA NPWGIKITRI EIKDIAPPKD LVDAMARQMK
AEREKRAQVL EAEGSRNAQI LRAEGAKQSA ILQAEGQREA AYREAEARER LAEAEAKATR
MVSEAIAAGD VQAINYFVAQ KYTEALAAIG TANNQKIVLM PMEASSLIGS LGGIGAIARE
VFGDAAAASQ RQRQSTPRTG PSLPLEKPED RS