Gene Smed_2703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2703 
Symbol 
ID5323572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2810824 
End bp2812389 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content65% 
IMG OID640791647 
Productcarbohydrate kinase FGGY 
Protein accessionYP_001328368 
Protein GI150397901 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGCG GTCTGAGGAG GACGGAAGGA CCGCGTGGTC TTGCGTCGCG GAGGAGGTAC 
GCAATGCAGC CGGACGAACG CTATGTCATC GGCCTGGATT CATCGACTCA ATCCGTCAAG
GCAGTCGCCT GGACGGCCGA TGGCACACCG CGGGCCGAAG GCCGTGCACC GCACCGCATT
TCGACGCCGC ATCCACTAAA GGCGGAGCAG AACGCCGAGG ACTGGTGGTC GGCCGCCTGC
GACGCCCTGT CCTCGCTCCT GCGCCAGATC GATTCTCACC GCGTCGACGG TGTCGCAATA
TCCAACCAGC GCGAAACAAT GGTTCTTCTC GGCGTGGACC GGAAGCCGCT CAGCCCGGCA
ACCCTCTGGC TCGACCGCCG GGCGCAGGAC ATCGTGCAGC CGTTCGCCGA TGAATTCGGC
AGCGAGCGCC TGCATGCGAT CTCGGGCAAG CCGATCGACG TCATTCCGTG CGTATATCGC
CTTCGTTACT ATCGCCAGCA TGAGCCGGAA TTGCTCGACC GCGCGGCGCA GATCCTGAGT
GTACACGATT TCCTGACACA GAAGCTGACG GGTGAAGCCG CTGCAAGCTG GACGAGCGCC
GACCCTTTCG GCATCCTCGA CATCGAGGCG AAGCAATGGT CCCGCGAAAT TCTCGATCAT
CTCGATATTC CTCTCAGCAA GCTGCCGCCG CTTCACCGGC CCGGCACGCT GATCGGCCGC
GTGACTGCGG ACGCCGCGGC CGCGACGGGG CTTGCCGCGG GCGTGCCGGT CTATGCCGGC
GGCGGTGATG GACATTGTGC GGGGCTCGGC GTCAATGTGA TCGAGCCGGG GGTCGTCTAT
CTTAATCTCG GCACGGCAGT GGTCGGCGGC TGCTGGACGC CGACGCGCAA GCTCAGCCGC
TACTGGCGCA CGCTGGTCTC GCCAAGCGGC GAAGGCTACC TGCTCGAAAG CTGCCAGCGC
GGCGGCGCTT ATTTCGTCAA CTGGCTGCTG GACACCTTTG CCGGCGGCCG GTCCGATCCG
GCTATTTTCG AACGGCTCGA AGCGGAGGCC GCCAGCCTGG ATGTCGGCTC CGGCGGAGTC
ACCGTTTGCT CCTATCTCAT GGGCTGCATG GATCCGCACT GGGACGCGGA TGCCCGAGCT
ACCTTCAGCG GCATGGGTCC GGAGACAGGC ATGGGCCATC TCTACCGTGC CTCCATGGAG
GCCATCACGC TTGAATTCGT CCGGTCTCTT TCCGAGATGA AATCGATGGG CGTGGCGGCC
GACCGGATCT TCGTCATCGG CGGTGGCGCC GGTAGCGCCC TCTGGCGGCA GATGATCGCC
GACGCAAGCG GACTCCCCGT CATACGCAGC CTTTCCAACG AGGCTTCCGC ACTCGGCGCC
GGCATGTCTG CTGCGATAGG TGCCGGCTGG TACGGGCATT TCGGCGAGGC CGCCGGCGCC
ATGTCACGGC TTGCCGAACA GATCGACCCG CGGCCTGCCG CTGCACAGGC ATGGGCCGCA
CTATCCCGCA GGCAGGCGAA CCTCTATCAG GCAACCCGCC GCCTGGATGC CTATGATGGC
CCCTGA
 
Protein sequence
MRCGLRRTEG PRGLASRRRY AMQPDERYVI GLDSSTQSVK AVAWTADGTP RAEGRAPHRI 
STPHPLKAEQ NAEDWWSAAC DALSSLLRQI DSHRVDGVAI SNQRETMVLL GVDRKPLSPA
TLWLDRRAQD IVQPFADEFG SERLHAISGK PIDVIPCVYR LRYYRQHEPE LLDRAAQILS
VHDFLTQKLT GEAAASWTSA DPFGILDIEA KQWSREILDH LDIPLSKLPP LHRPGTLIGR
VTADAAAATG LAAGVPVYAG GGDGHCAGLG VNVIEPGVVY LNLGTAVVGG CWTPTRKLSR
YWRTLVSPSG EGYLLESCQR GGAYFVNWLL DTFAGGRSDP AIFERLEAEA ASLDVGSGGV
TVCSYLMGCM DPHWDADARA TFSGMGPETG MGHLYRASME AITLEFVRSL SEMKSMGVAA
DRIFVIGGGA GSALWRQMIA DASGLPVIRS LSNEASALGA GMSAAIGAGW YGHFGEAAGA
MSRLAEQIDP RPAAAQAWAA LSRRQANLYQ ATRRLDAYDG P