| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2702 |
|---|
| Symbol | |
|---|
| ID | 5323571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2809744 |
|---|
| End bp | 2810769 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640791646 |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_001328367 |
|---|
| Protein GI | 150397900 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGACA AATGCCACCC GCCTCTGCCA GATAGCCAAA TGGCAAGAGA GAAGAGTTCA
GCCAGGGCTG GCGACGAATC GGCGAAAAGC GTGCCCACGG AGTTCGATGA CGCCGTGATG
TGGGCCGCAT GGCTCTACTA TGCGGATCAG ATGACGCAGA GCGAGATCGC CAAGCAGCTC
AACGTATCTC GCGCAACCAT CGTCAATTAT CTGCAAGAAG CGCGCGAGCG CGGCATCGTC
TCGGTCAACA TCAATCCCAA GGCCGGTGGC CGCACCAGTG TCGCCCGCGC TCTGATGGAG
AAATTCAACC TTCAGGGCGC CTTCGTCATC CCCAACAGCG ATGAGGAAAG CCTGTCGCGA
AGGCTCGGCG ACGCCGGTGC GCGGGTATTG GCCGACCAGA TCGAGGATGG AGATACGATC
GGCGTTGCCT GGGGCCGCAC AGTGCTCGCC GTCGCCGACC GAATTTCGTT GCCGCGGCCG
GTCGGCAACC TCACTGTCGT TCAGGTCTCC GGCAGCTCGA CCGGAGAACC GAATTTCTCG
CCCGAACTCT GCACTTCGCT GCTTTCGAAC CGCATTCATG CGCGCTGCGT CAACCTCCTG
GCACCCGCCG TGCTGTCGAC ACGCGAACTG AAGGCGGCGC TGCTCAATGA ACCCGTGCTC
CGGAAGCAGA TGGAGCTGGT CCATTCGACC AATCGCATTC TCTTCGGCGT CGGCGACATC
GGTCCGAAGA GCACCGTGCG GGCATCCGGC ATCGCCAGCC AGGAGGAGAT CGACGATTAC
GTCGCGCGCG GCGCCACCGC CGTGATTATC GGGCGCTTCA TCGATGCGCA TGGCGCTGCG
ATCGGCGGCG ACCACGACGA GCGCATGGTC GGCATCTCGC TCGACGAACT GAAGCAGGTG
GAGAGCCGAA TCTGCGTTGC GGGTGGCGCG CTTAAAATCG CTGCGATCAC CGCCACGCTC
GAAGCAGGCT ACGCCACCCA TTTCGTGACA GACATCGCTA CGGGAGAGGC GTTGCTGGCG
GAGTGA
|
|---|
| Protein sequence | MIDKCHPPLP DSQMAREKSS ARAGDESAKS VPTEFDDAVM WAAWLYYADQ MTQSEIAKQL
NVSRATIVNY LQEARERGIV SVNINPKAGG RTSVARALME KFNLQGAFVI PNSDEESLSR
RLGDAGARVL ADQIEDGDTI GVAWGRTVLA VADRISLPRP VGNLTVVQVS GSSTGEPNFS
PELCTSLLSN RIHARCVNLL APAVLSTREL KAALLNEPVL RKQMELVHST NRILFGVGDI
GPKSTVRASG IASQEEIDDY VARGATAVII GRFIDAHGAA IGGDHDERMV GISLDELKQV
ESRICVAGGA LKIAAITATL EAGYATHFVT DIATGEALLA E
|
|---|
| |