Gene Smed_2695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2695 
Symbol 
ID5323564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2801697 
End bp2802422 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID640791639 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001328360 
Protein GI150397893 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACA AACCGCTGAT CGCGATCACT GGCGCCAGCT CCGGCATTGG CGAGGCCGTC 
GCGCGGGCCT TCTCCAGGGC CGGGCATCCG CTTCTGCTGA TCGCCCGCAG GCTCGACCGG
CTCGAGGCGC TCGGCCTGCC CAACGCCTTG CTGAAGAAGG CCGATGTCCG CGATCGCGCG
GCACTTGCCG CCGCCGTGGG CGAGGCGGAG GCGAGGTTCG GCCCGGTCGA CATGATGTTT
GCCAACGCCG GAATCGCGCG GCTTGGCGAC ATCGCCCGCC AGGCGCCCGA GGAATGGGAC
GAGATGATCG ACATCAACAC CAAGGGTGCG ATGAACAGCG TGCATGCCGT GCTCTCGGGA
ATGATCGGGC GGAAGCACGG AACACTTGTA ATGATGAGCT CGATTGCAGG GCGCAAGGTC
TATCCGGACC ATACGGTCTA TTGCGGCACG AAGTTCTTCG TCCACGCGGT CTCGGAAAGT
CTGCGCGAAT ATCTGGCACC GCACGACGTG CGCGTTATCG TGGTCTCCCC CGGCATTATC
GATACGGAAG TGCTGGATCA TGTGAAGGAC GAGACGACGC TCGCCAATTA CAAGGCGAAC
AAAGCGGCGA TCGGCGGCGG CATTTCCGCC GACGTCGTCG CAGATCTCAT CCTCGACGCC
TATCAGCTGC CGCAGCGAGC GATCGTCCAG GAAATCGTCA TCACGCCGAC CCGACAGAAA
TACTGA
 
Protein sequence
MPDKPLIAIT GASSGIGEAV ARAFSRAGHP LLLIARRLDR LEALGLPNAL LKKADVRDRA 
ALAAAVGEAE ARFGPVDMMF ANAGIARLGD IARQAPEEWD EMIDINTKGA MNSVHAVLSG
MIGRKHGTLV MMSSIAGRKV YPDHTVYCGT KFFVHAVSES LREYLAPHDV RVIVVSPGII
DTEVLDHVKD ETTLANYKAN KAAIGGGISA DVVADLILDA YQLPQRAIVQ EIVITPTRQK
Y