| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2693 |
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| Symbol | |
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| ID | 5323562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2798446 |
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| End bp | 2800494 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791637 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001328358 |
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| Protein GI | 150397891 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGC GCTGGTCGGA CTCCGAGTTC ACCTCCATCA TCGATGCCTA TGTCGCCAAA
GGCGTCAATC GGGACCTCGC CATTCGCACC TATACGACCC GTCTGCTCGG CTCCGATCCG
GAACTGGTAT TGCACGGCGG CGGAAACACT TCGGTCAAGA CCACCTTTAC GGAGATGGAC
GGCAGCGAGG TGGACGTGCT CTGCGTCAAG GGCAGCGGAT GGGATATGGG CACGATCGAG
CCGCAGGGCC TGCCGGCCGT CCGCCTGCAG CCGCTGCAGG CCATGATCGA TTTCGAGACG
CTCTCCGACG ACGACATGGT GATGCTTCAA CGCCGCCTGC TTGTCGATCC AGCGGCGCCC
AATCCGTCGG TCGAGGCCAT TCTGCATGCG ATCCTGCCCT TCAAGCACAT CGATCATACC
CATGCGAACG CCATCGTCTC GCTCACCAAT CAGCCGCACG GCGAGGATCT GATCCGAGAA
CTATTCCCCG ATGCGATCAT CGTTCCCTAT GTGATGCCGG GCTTCGATCT GGCAAAGGCT
TGCGACACTG CCTTCAAGGC TGATCCGAAA GGCGACGGCA TGATCCTGCT GAAGCACGGC
ATCTTCACCT GGTCGGAGGA TCCGCGCGAA GCCTACGAGG ATATGATCGC CAAAATCGAC
AAGGCCGAGC GGCGCCTGTC CCAAGGCCGG GCGAAGCCGT TCAGGAGCAT TGCCGTTCCC
GCAGGCCTGG CCGCTGCCGC GGATATCGCG CCGATTCTGC GTGGTGCGCT GGCGATCGAC
ACCGGTATCG AAGGAGCGCC GAAACGCTTC GTTCTCGAAC ATCGTACCAG CGAAAAGATA
CTCGACTTCT GCAACGCCGA AAATATCGAA AGCCTCGTCC GCCGCGGCAA TGCGACGCCG
GAACATGTGA TCCATATCAA GCGCTTCGGC GTTGCTCTGC CCGCTCCGGA GAAGAACAGA
CTTGGAGAAT GGGCGGTGCG TGCAAGGGAA GCGGTTGCCG CTTATCAGGC CGACTACCAG
GCCTATTTCG AACGGAACAA TGCCCGCGTC GGGGGTGGCA AGCGCATGCT CGATCCGAAG
CCGCGCGTCT TCTACGTCGC CGGCATCGGC CTCTTCGCCG CCGGGGCAGC GCGAAAAAAC
GCGACGGTCG GCGCCGACGT TGCGGAAGCA ACGATAGATG TCATCACGAA GGCGGAAGGC
ATCGAGGCCT TCGAGGCGCT CTCGGAGCGC GATCTTTTCG ACATCGAATA CTGGTCGCTC
GAGCAGGTGA AGCTGACAAA GGTGCAGGAA AAGCCGCTGA CGCGGCAGGT TGCAATCGTC
ACCGGCGCGG CAAGCGGACT CGGCTTTGCT GTCGCGGAAG CCTTGAAGGC GGAAGGTGCC
GAACTCGCGC TCTTCGACAT TTCAGAAGAT GCGCTGAACG CGGCGGCGAA AAAACTCGGC
GCGCTGCCGG TGCTCTGCGA CGTGACGAGT TCCGAGGCGG TCGACGCGGC GGTCGCCAGG
GTCGCGCAGC ACTATGGTGG TGTGGATATT CTGATCTCGA ATGCGGGCGC AGCCTTCCAG
GGCAAACTGC TCAGCGTCGA TGAGGCGACC TTCCGAAAGG CCTTCGATCT CAATTTCTGG
AGCCATCACT ACGTCGCGCG CGCGGTGGTA CGCGTCATGG AACAGCAGAA GTCAGGCGGC
TCGCTGGTCT TCAACGTCTC CAAGCAAGCC GTGAATCCCG GCGCCGACTT CGGCCCCTAT
GGAACCTCGA AGGCGGCACT GATGGCGCTG ATGCGGCAAT ATGCCATTGA GCACGGCGGC
TCCGGCATCA CGTCGAACGC CGTCAATGCG GACCGGATTC GCACCGGCCT GATGACCGAC
AAGATGGTCG AGGAACGCTC GATGGCGCGT GGCCTGACGC CGGAGGATTA CATGCGGGGC
AACATGCTTC GCCGCGAGGT GACCGGCGCC GATGTGGCAG CGGCCTTCGT GCATCTCGCC
AAGGCCCGGA CCTCCACCGG AGCAGTCGTT ACCGTCGACG GCGGCAACGT TGCCGCGATG
ATGCGTTGA
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| Protein sequence | MKSRWSDSEF TSIIDAYVAK GVNRDLAIRT YTTRLLGSDP ELVLHGGGNT SVKTTFTEMD
GSEVDVLCVK GSGWDMGTIE PQGLPAVRLQ PLQAMIDFET LSDDDMVMLQ RRLLVDPAAP
NPSVEAILHA ILPFKHIDHT HANAIVSLTN QPHGEDLIRE LFPDAIIVPY VMPGFDLAKA
CDTAFKADPK GDGMILLKHG IFTWSEDPRE AYEDMIAKID KAERRLSQGR AKPFRSIAVP
AGLAAAADIA PILRGALAID TGIEGAPKRF VLEHRTSEKI LDFCNAENIE SLVRRGNATP
EHVIHIKRFG VALPAPEKNR LGEWAVRARE AVAAYQADYQ AYFERNNARV GGGKRMLDPK
PRVFYVAGIG LFAAGAARKN ATVGADVAEA TIDVITKAEG IEAFEALSER DLFDIEYWSL
EQVKLTKVQE KPLTRQVAIV TGAASGLGFA VAEALKAEGA ELALFDISED ALNAAAKKLG
ALPVLCDVTS SEAVDAAVAR VAQHYGGVDI LISNAGAAFQ GKLLSVDEAT FRKAFDLNFW
SHHYVARAVV RVMEQQKSGG SLVFNVSKQA VNPGADFGPY GTSKAALMAL MRQYAIEHGG
SGITSNAVNA DRIRTGLMTD KMVEERSMAR GLTPEDYMRG NMLRREVTGA DVAAAFVHLA
KARTSTGAVV TVDGGNVAAM MR
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