Gene Smed_2685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2685 
Symbol 
ID5323554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2788831 
End bp2789988 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content64% 
IMG OID640791629 
Productaminodeoxychorismate synthase 
Protein accessionYP_001328350 
Protein GI150397883 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0147] Anthranilate/para-aminobenzoate synthases component I 
TIGRFAM ID[TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.627045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC ACGCGCCCTA TGTCCTCTTC CGGGACGACA GCGAGAACCG CACCACGGTT 
TTCGCCGACC CTTTGCGCGT CGTCACGGCC CGGACGAGGG CTGAGTTTCA CCGCGGCCTT
GGTGAAATCG AAGCGGCCCA TCGTGCGGGA AAATGGATCG CGGGCTTCAT GGCCTATGAA
GCGGGGCATC TTTTCGAGAC GAAGCTGGCC CCCTTCGCGC CGGAGAACCG GGAAACGCCG
CTGATGTCAT TCGGGGTCTT CGACGCGCCG GCGGAGGACC ATGCGCTTGC CGTGGCGCGG
CGGCGCAGCG AAAACGAACC CTTCCTCCTG GAGCCTCGCG CCGGCTGGGA TTTTCCTGCT
TATCGCCAGC GCTTCGAAAG GCTGCACCGG CATCTGCGCC AGGGCGATTG CTACCAGGCG
AACCTGACCA TGCCGATCCA AGCGCGCTGG TCCGGCGATC CGCTTGCCGC CTTCTGGTCG
CTCATCGAGC GTCAGCCGGT GAGATACGGC GCACTCGTCG CCCTCGACGG CCCAGTGCTG
CTGTCGCGCT CACCCGAGCT TTTCTTCCGG GTCGATGCCG AGGGCTGGAT CGAAACGCAC
CCGATGAAGG GCACGGCGCG GCGCGGCGCG AGCCCTAAGG AAGATGATGC GATCATCGCG
GCGATGCGCG CCGACGAGAA GACGCAAGCC GAAAACCGCA TGATCGTCGA CCTTCTGCGC
AACGACATCT CCCGCGTCAC CGAAGTCGGC ACGCTCGACG TGCCTAAACT CTTCGATATC
GAGACCTATC CGACGGTCCA TCAGATGGTG AGCCATGTCA GGGCGAAGCT TCTGACGGAC
ATCGGCATCG CCGACATCTT CGCCGCACTC TTTCCCTGCG GCTCCGTTAC CGGCGCGCCG
AAGATGCGGG CCATGGAAAT TCTTCACGAC CTGGAGTCCG GCCCGCGCGA CGCCTATTGT
GGCGCGATCG GCTACATCGC GCCGGACGGG GCGATGCGCT TCAGCGTCGC GATCCGCACC
ATTTCCCTTT TCCCCGGGGG GGAGGCGGTG TTCAATGTCG GCGGTGGCAT CGTCTTCGAT
TCGACGGCCG AGGCGGAATA CGAAGAATGC CTGCTGAAGG CCCGTTTCGC CGTCGGCGAT
GCGGAGATCG CTCGATGA
 
Protein sequence
MIEHAPYVLF RDDSENRTTV FADPLRVVTA RTRAEFHRGL GEIEAAHRAG KWIAGFMAYE 
AGHLFETKLA PFAPENRETP LMSFGVFDAP AEDHALAVAR RRSENEPFLL EPRAGWDFPA
YRQRFERLHR HLRQGDCYQA NLTMPIQARW SGDPLAAFWS LIERQPVRYG ALVALDGPVL
LSRSPELFFR VDAEGWIETH PMKGTARRGA SPKEDDAIIA AMRADEKTQA ENRMIVDLLR
NDISRVTEVG TLDVPKLFDI ETYPTVHQMV SHVRAKLLTD IGIADIFAAL FPCGSVTGAP
KMRAMEILHD LESGPRDAYC GAIGYIAPDG AMRFSVAIRT ISLFPGGEAV FNVGGGIVFD
STAEAEYEEC LLKARFAVGD AEIAR