| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2683 |
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| Symbol | |
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| ID | 5323552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2785161 |
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| End bp | 2786810 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791627 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001328348 |
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| Protein GI | 150397881 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.272019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.67062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCAT TTCTCAAAAC AGGATGTTCA GCCGTTTGTG GGACGAATGG CTCGCATGAT
TTGGCACATG AGGTTTGCCA ACAGTACCCC GCATGTCCCA GGCAGGAGGC TTTCGTGACA
GCTCATATTC TTGTCATCGA CGACGATCCG GTGCAGCGGC GGCTGCTGAC GAACATGATC
GAGCGGCTCG GCCATGTCGC GCATCTCGCC GACAACGGGC GCAGCGGGCT GGAGCTCATG
CAGCGCAAGG GTGGCATCAT CAATGTCATT CTGCTCGATC TCCTGATGCC GGGAATGAAC
GGCCACAGCT TTCTGGAAGC GCTCGCCGAG CGAGGCGTCG ACACCCCCGT CATCGTACAG
ACGGGGCAGG GGGGGATCGA AACAGTGGTT CAGGCGATGC AGGCCGGCGC CTTCGATTTC
CTCGTCAAGC CCGTTTCGCC GGAGCGGCTG TCGATCGCCC TGGGTAACGC GCTGAAGATG
GCGAGCCGAG ACGGCAAGGT CAAAACCGCC CGGCGTCCAC GCGGCGGGTC CGTCGGTTTC
GACGATATCG TTTCGGCAAG CCCGGCGATG ATCCGTGTCA TCGATCTCGC ACGCCGCGCC
GCGCAGTCGA ACATCCCGGT CGTGCTCGAA GGCGAATCGG GCGTCGGCAA GGAAATGGTC
GCCCGCGCAA TCCAGGCGGC CAGCGATCGG GCGACGAAAC CGTTCGTCAC CGTGAACTGC
GGGGCCATCC CCGGCAATCT CGTCGAGAGC ATTCTCTTCG GCCATGAGAA GGGCGCGTTT
ACCGGCGCAA GCGAAAAGCA CAGCGGCAAG TTCGTCGACG CCGATGGCGG CACGTTGTTT
CTCGACGAGA TCGGCGACCT CCCGCTCGAG GTCCAGGTCA AGCTGTTGCG CGCCGTCCAA
CAGGGCGAGA TCGAAACGGT CGGGGCTCGT CAGCCGCAGA AGGTGAATGT GCGGCTTATC
TCGGCCACCA ACAAGGACCT CATCAACGAG GTACGCGAGG GCCGGTTTCG CGAAGACCTC
TACTATCGGC TGAACGTCTT CCCGATCACC ATACCGGCGC TGCGCCGGCG CAAGGAGGAC
ATCCCCGTTC TGGTCCGAGC CTTCGTCGAG CGCTTCGCCG CAGAGCAGAG GCTCGACCAG
CGGCTGACGG TCTCGAACGG TGCAATGGCG CTGCTGACAT CCTATGACTG GCCGGGTAAT
ATCCGGCAGC TCGAAAATGC GATCTTCCGC GCCGTCGTTC TCGCCGAAGG TCACGAACTC
ACCGTCAGGG ATTTTCCGCA GGTCGCCACC CAGATACCGG GATATATCGT TGCCGACCGG
ACCGGTCTCT CCTGGGGTGA CGGCGGTCCG GAAGGCCGCA CCGCGCCCGA TCGGCCGGCC
GCCGTGACGG CCGATGCCGG GGCACTGGAA ACCGCACCTA CCGATCAACG GGACGAACGC
ATTGAGAACG CAATAGCCAG CCTGAGCGAG GGCGGCGAGG TCAGGAAGCT CGCGGAGGTC
GAGGAGGAGC TGATTCGCTT TGCCTTGAAA TTCTACCGCG GCCAGATGAG CCAGGTTGCC
CGCAAACTGG GAATCGGTCG ATCGACCCTT TACCGCAAAC TCAAGGATTA CGGCATCGAT
CCCGACAATC CCTTGCGCGA GGCGGCATAA
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| Protein sequence | MQAFLKTGCS AVCGTNGSHD LAHEVCQQYP ACPRQEAFVT AHILVIDDDP VQRRLLTNMI
ERLGHVAHLA DNGRSGLELM QRKGGIINVI LLDLLMPGMN GHSFLEALAE RGVDTPVIVQ
TGQGGIETVV QAMQAGAFDF LVKPVSPERL SIALGNALKM ASRDGKVKTA RRPRGGSVGF
DDIVSASPAM IRVIDLARRA AQSNIPVVLE GESGVGKEMV ARAIQAASDR ATKPFVTVNC
GAIPGNLVES ILFGHEKGAF TGASEKHSGK FVDADGGTLF LDEIGDLPLE VQVKLLRAVQ
QGEIETVGAR QPQKVNVRLI SATNKDLINE VREGRFREDL YYRLNVFPIT IPALRRRKED
IPVLVRAFVE RFAAEQRLDQ RLTVSNGAMA LLTSYDWPGN IRQLENAIFR AVVLAEGHEL
TVRDFPQVAT QIPGYIVADR TGLSWGDGGP EGRTAPDRPA AVTADAGALE TAPTDQRDER
IENAIASLSE GGEVRKLAEV EEELIRFALK FYRGQMSQVA RKLGIGRSTL YRKLKDYGID
PDNPLREAA
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