Gene Smed_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2678 
Symbol 
ID5323547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2780252 
End bp2781046 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content63% 
IMG OID640791622 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_001328343 
Protein GI150397876 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3931] Predicted N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.222197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACT ACTCTCCCTA CGAGATCATC GAGGGCAATC CTGCCAAGGG CCTCGTGCTT 
CTTGCCGACC ATGCAATGAA CCGGCTTCCG GCAGAGTACG GCCGGCTGGG CCTGCCGGAA
AGCGCTTTCG AGCGTCACAT CGCCTATGAT ATCGGTATCG AACCGCTCAC ACGGCAATTG
TCGGTCGCAC TCGAGGCGCC GGCGGTCCTC GGCTGTTTCT CGCGCCTCCT GATCGACCCG
AACCGCGGCG AAGACGACCC GACGCTGATC ATGAAGATCT CCGACGGCGC GATCGTTCCG
GGCAACCATC CGATAGCCGA CGAGGAGTGG CAACACCGGA TAGAGCGCTT TCACCGCCCC
TACCATGGAG CCGTATCGGA GACCATCGCC CGGACCGCGG CCGCCGGCGG ACGAGCGCCT
CTGGTCATCT CCTTGCATTC CTTCACGCCT TCTTGGAAAG GCATTGCGCG TCCGTGGCAT
GCCTCGGTTC TGTGGGACAA CGATCCGCGT GCCGTCTTTC CGCTGATGGA ACGGCTCCAG
GCGGACGGCG AGATCGTGGT CGGCAACAAT GAACCCTATG ACGGCGCACT GCGTGGCGAT
ACCATGTATC GGCACTGCAT GACGCCCGGG ATCGCGCATG CACTGATAGA AGTCCGCCAG
GATCTTATAG CCGATACAGC GGGCGTCGCC GCCTGGGCGG AACGACTGGC GCCCATCCTT
GCGGAGCTCA ACGACCTGCC GGAGCTCCAC GTCTATCAAC GTCACCCGTC GCGCACGGGC
GCCTATGAAA ACTGA
 
Protein sequence
MQHYSPYEII EGNPAKGLVL LADHAMNRLP AEYGRLGLPE SAFERHIAYD IGIEPLTRQL 
SVALEAPAVL GCFSRLLIDP NRGEDDPTLI MKISDGAIVP GNHPIADEEW QHRIERFHRP
YHGAVSETIA RTAAAGGRAP LVISLHSFTP SWKGIARPWH ASVLWDNDPR AVFPLMERLQ
ADGEIVVGNN EPYDGALRGD TMYRHCMTPG IAHALIEVRQ DLIADTAGVA AWAERLAPIL
AELNDLPELH VYQRHPSRTG AYEN