| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2676 |
|---|
| Symbol | |
|---|
| ID | 5323545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2778092 |
|---|
| End bp | 2779531 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640791620 |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | YP_001328341 |
|---|
| Protein GI | 150397874 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | [TIGR01064] pyruvate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.18741 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.256993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGGA ACAGGAAAGT CAAAATCCTC GCTACGCTGG GGCCGGCATC GGCCGATGAG
CAGATGATCC AGAAGCTGCA CGAGGCGGGG GCCGATCTGT TCCGTATCAA TATGAGCCAT
GCGAGTCATG AAGTCATGCG CACTCTGATA GAGCGGATCC GTTCGGTCGA GGCGCGTTGC
GGCCGCCCCA TCGGCATTCT GGCCGACCTG CAGGGTCCGA AGCTGCGCGT CGGAAAGTTC
GCGGAGGGAA AGGTCGAGCT CAAGCCCGGT CAGACCTTCA CGCTCGACAA TCGGGATGTG
CCCGGGGACA GCCGCCGCGT CTATCTTCCG CATCCGGAGA TCCTCGAAGC CGTCAAGCCC
GGCCATCGTT TGCTGATCGA TGATGGCAAG CTGCATCTGC GCGCCGAAAA AACCGATGGC
AAGAGCATCG TCACCACGGT CGTCTCCGGC ACGAGGATCT CTGATCGCAA GGGCGTCAGC
CTGCCCGATA CGCTGCTCGG CGTCGGCGCG CTGACCGACA AGGACCGCGT CGACCTCGAT
GCCGTGCTGG CGACGGGGCA GGTCGACTGG GTGGCGCTTT CCTTTATCCA GCGCCCTGAA
GACCTTGCGG AGGTTCGTAA GATCGCACGG GGTCGCGTCG GGCTGATGTC GAAAATCGAA
AAGCCGCAGG CGATCGAGCG GATTGACGAG ATCATCGAGC TTTCGGATGC TCTGATGGTG
GCCCGCGGCG ATCTTGGCGT CGAGATGCCG CTCGAATCCG TGCCGGGGCT TCAAAAGCAA
TTGACGCGGG CCTGCCGGCG AGCCGGCAAG CCCGTCGTGG TCGCAACGCA GATGCTTGAA
TCGATGATCT CCTCGCCGGT GCCGACGCGC GCCGAGGTGT CGGACGTGGC CACCGCCGTG
TTCGAAGGTG CCGATGCGGT GATGCTCTCG GCCGAGTCCG CTTCCGGCGA GTACCCGATC
GAGGCGGTTT CGACCATGGC GTCGATCGCC AGCAACGTCG AACGCGATCC GCATTATCCG
GGGATCATCT ATGCCCAGCG CACGCCGCCG GAAGCGACGG GTGCGGATGC CATCTCGCTT
GCCGCCCACC AGATCGCCGA AACGCTCAAG CTCGCAGCGA TCGTAACCTA CACATCCTCC
GGCACGACCG GGCTTCGGGC GGCGCGCGAG CGGCCCCAGG TGCCGGTCAT CGCGCTTTCG
CCAATCGTCC AGACGGCCCG TCGCCTTTCC GTGGTCTGGG GCCTGCACTG CGTCGTCACC
GAGGATGCCA CCGACCTCGA CGACATGGTC AACCGCGCCT GTCGTATCGT CTCGACAGAA
GGTTTCGGCA AGCCCGGAGA CCGCGTCATC GTTACCGCCG GTGTCCCGCT TGGTACCCCG
GGGGCCACGA ACATGTTGCG CATCGCCTAT ATCGGCTCGG ACGGGCAGTC GGCGGTGTAA
|
|---|
| Protein sequence | MRRNRKVKIL ATLGPASADE QMIQKLHEAG ADLFRINMSH ASHEVMRTLI ERIRSVEARC
GRPIGILADL QGPKLRVGKF AEGKVELKPG QTFTLDNRDV PGDSRRVYLP HPEILEAVKP
GHRLLIDDGK LHLRAEKTDG KSIVTTVVSG TRISDRKGVS LPDTLLGVGA LTDKDRVDLD
AVLATGQVDW VALSFIQRPE DLAEVRKIAR GRVGLMSKIE KPQAIERIDE IIELSDALMV
ARGDLGVEMP LESVPGLQKQ LTRACRRAGK PVVVATQMLE SMISSPVPTR AEVSDVATAV
FEGADAVMLS AESASGEYPI EAVSTMASIA SNVERDPHYP GIIYAQRTPP EATGADAISL
AAHQIAETLK LAAIVTYTSS GTTGLRAARE RPQVPVIALS PIVQTARRLS VVWGLHCVVT
EDATDLDDMV NRACRIVSTE GFGKPGDRVI VTAGVPLGTP GATNMLRIAY IGSDGQSAV
|
|---|
| |