Gene Smed_2675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2675 
Symbol 
ID5323544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2777296 
End bp2777907 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content62% 
IMG OID640791619 
ProductTPR repeat-containing protein 
Protein accessionYP_001328340 
Protein GI150397873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.679716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.152424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA TGCGCGTTTT CTCGAACTTG ATTCTGGCAT GTCTTGCCAT GTGCGCCACG 
ACAGTGGACA GCACGCCGCT TGTGGCGGCA GAGCCCTCGC CTCAAACAGA GGTCGCGGCC
CTCACCACTC CAAAAGAGCG CGTCGACGCA CTCTTCACCG ATCTCAAGAG GGAAGTCGAG
GAGGACAAGG CCCGTCAGGT CGCCGAACGC ATTCGCCTCG AATGGCAGGA TTCCGGCAGC
GCGACCGTGA ACCTTCTGAT GCAATGGGCC AACAAGGCGA TCGCCGAGGA GAAGCAGACG
GCGGCGCTCG ATCTTCTCGA CCAGGTGATC GCCCTTTCGC CCGACTATGT CGAAGGCTGG
AACCGTCGCG CCACGCTTCA TTACCAGATG GGCAACTTTC GCAAGTCGAT GTCCGACATC
AACCGCGTGC TCGCCTTGGA GCCTCGCCAT TTCGGCGCAC TCGCCGGCAT GGCCACCATG
TTGGAGGCTG CCGGCAAGGA AGAGCTCGCC ATGCGTGCAT GGCAGCAATT CCTCGACGTC
TATCCGTCCG ACCGGAAGGC GCAGGAGCAG CTTGGCGAAT TGGCAGAAAA GCTCGCCGGC
AGCCGGACGT GA
 
Protein sequence
MPAMRVFSNL ILACLAMCAT TVDSTPLVAA EPSPQTEVAA LTTPKERVDA LFTDLKREVE 
EDKARQVAER IRLEWQDSGS ATVNLLMQWA NKAIAEEKQT AALDLLDQVI ALSPDYVEGW
NRRATLHYQM GNFRKSMSDI NRVLALEPRH FGALAGMATM LEAAGKEELA MRAWQQFLDV
YPSDRKAQEQ LGELAEKLAG SRT