Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2675 |
Symbol | |
ID | 5323544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2777296 |
End bp | 2777907 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791619 |
Product | TPR repeat-containing protein |
Protein accession | YP_001328340 |
Protein GI | 150397873 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.679716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.152424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCA TGCGCGTTTT CTCGAACTTG ATTCTGGCAT GTCTTGCCAT GTGCGCCACG ACAGTGGACA GCACGCCGCT TGTGGCGGCA GAGCCCTCGC CTCAAACAGA GGTCGCGGCC CTCACCACTC CAAAAGAGCG CGTCGACGCA CTCTTCACCG ATCTCAAGAG GGAAGTCGAG GAGGACAAGG CCCGTCAGGT CGCCGAACGC ATTCGCCTCG AATGGCAGGA TTCCGGCAGC GCGACCGTGA ACCTTCTGAT GCAATGGGCC AACAAGGCGA TCGCCGAGGA GAAGCAGACG GCGGCGCTCG ATCTTCTCGA CCAGGTGATC GCCCTTTCGC CCGACTATGT CGAAGGCTGG AACCGTCGCG CCACGCTTCA TTACCAGATG GGCAACTTTC GCAAGTCGAT GTCCGACATC AACCGCGTGC TCGCCTTGGA GCCTCGCCAT TTCGGCGCAC TCGCCGGCAT GGCCACCATG TTGGAGGCTG CCGGCAAGGA AGAGCTCGCC ATGCGTGCAT GGCAGCAATT CCTCGACGTC TATCCGTCCG ACCGGAAGGC GCAGGAGCAG CTTGGCGAAT TGGCAGAAAA GCTCGCCGGC AGCCGGACGT GA
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Protein sequence | MPAMRVFSNL ILACLAMCAT TVDSTPLVAA EPSPQTEVAA LTTPKERVDA LFTDLKREVE EDKARQVAER IRLEWQDSGS ATVNLLMQWA NKAIAEEKQT AALDLLDQVI ALSPDYVEGW NRRATLHYQM GNFRKSMSDI NRVLALEPRH FGALAGMATM LEAAGKEELA MRAWQQFLDV YPSDRKAQEQ LGELAEKLAG SRT
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