Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2668 |
Symbol | |
ID | 5323537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2773423 |
End bp | 2774205 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791612 |
Product | hypothetical protein |
Protein accession | YP_001328333 |
Protein GI | 150397866 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.161838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCCCG ACATCGACTT CTATCTCGTT GCCATTCCGG CCGTTCTGCT CGTCGGCCTC GCCAAGGGAG GGATGGGCGA GGCTCTCTCG CTGATGGGGG TGCCCATCCT GTCCATGGCC GTTTCGCCGG TGCAAGCTGC GGCGCTGCTT CTGCCTATCC TGATCGCCAT GGACATCGTC TCTCTCTGGA TCTGGCGAAA GCACGGCGAT CGGCAAACCT ATATCATGCT GCTCCCAGGC GCGCTGGTCG GCATCGCCGT CGGCTGGGCT ACGTCCGCCT ATGTGCCACG CGACGCGCTG AGGCTGATCA TCGGTCTCAT CACTGTCGTC TTCGTGCTGC GCTATGTCTA CACTTTGTGG CGCAGCCGCA ACGGCATCGC CATTCAGCCG AAGCCGCAGC GCTCCGGCCC GGCTGCTCTC TGGGGCACCT TCGCGGGCTA TGGCAGCTTT GTCGCTCATG CAGGCGGCCC TCCATTCCAG ATCTACGCGC TGCCGCTGAA GCTCGCGCCC CGTGAATATA CCGGCACGAT CGTGCGCTTC TTCGCCACTC TCAACGCCGT GAAACTCATC CCCTATTTCG CCCTCGGCCA ACTCGACCTC AGCAATCTCA AGACCTCGGC AACGCTCTTC CCGCTTGCCA TGGCCGCAAC CGCCTGCGGG GCCTGGATCG TCCGGCGCAT GAAACCGCAG GTCTTCTATC CGTTCATGTA CATGATGGCA TTCGTCGCCG GCTGGAAGCT CGTCTGGGAC GGCCTCGGAA GCGTAATGTC CGGGACGTTG TAG
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Protein sequence | MLPDIDFYLV AIPAVLLVGL AKGGMGEALS LMGVPILSMA VSPVQAAALL LPILIAMDIV SLWIWRKHGD RQTYIMLLPG ALVGIAVGWA TSAYVPRDAL RLIIGLITVV FVLRYVYTLW RSRNGIAIQP KPQRSGPAAL WGTFAGYGSF VAHAGGPPFQ IYALPLKLAP REYTGTIVRF FATLNAVKLI PYFALGQLDL SNLKTSATLF PLAMAATACG AWIVRRMKPQ VFYPFMYMMA FVAGWKLVWD GLGSVMSGTL
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