Gene Smed_2668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2668 
Symbol 
ID5323537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2773423 
End bp2774205 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID640791612 
Producthypothetical protein 
Protein accessionYP_001328333 
Protein GI150397866 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.161838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCCG ACATCGACTT CTATCTCGTT GCCATTCCGG CCGTTCTGCT CGTCGGCCTC 
GCCAAGGGAG GGATGGGCGA GGCTCTCTCG CTGATGGGGG TGCCCATCCT GTCCATGGCC
GTTTCGCCGG TGCAAGCTGC GGCGCTGCTT CTGCCTATCC TGATCGCCAT GGACATCGTC
TCTCTCTGGA TCTGGCGAAA GCACGGCGAT CGGCAAACCT ATATCATGCT GCTCCCAGGC
GCGCTGGTCG GCATCGCCGT CGGCTGGGCT ACGTCCGCCT ATGTGCCACG CGACGCGCTG
AGGCTGATCA TCGGTCTCAT CACTGTCGTC TTCGTGCTGC GCTATGTCTA CACTTTGTGG
CGCAGCCGCA ACGGCATCGC CATTCAGCCG AAGCCGCAGC GCTCCGGCCC GGCTGCTCTC
TGGGGCACCT TCGCGGGCTA TGGCAGCTTT GTCGCTCATG CAGGCGGCCC TCCATTCCAG
ATCTACGCGC TGCCGCTGAA GCTCGCGCCC CGTGAATATA CCGGCACGAT CGTGCGCTTC
TTCGCCACTC TCAACGCCGT GAAACTCATC CCCTATTTCG CCCTCGGCCA ACTCGACCTC
AGCAATCTCA AGACCTCGGC AACGCTCTTC CCGCTTGCCA TGGCCGCAAC CGCCTGCGGG
GCCTGGATCG TCCGGCGCAT GAAACCGCAG GTCTTCTATC CGTTCATGTA CATGATGGCA
TTCGTCGCCG GCTGGAAGCT CGTCTGGGAC GGCCTCGGAA GCGTAATGTC CGGGACGTTG
TAG
 
Protein sequence
MLPDIDFYLV AIPAVLLVGL AKGGMGEALS LMGVPILSMA VSPVQAAALL LPILIAMDIV 
SLWIWRKHGD RQTYIMLLPG ALVGIAVGWA TSAYVPRDAL RLIIGLITVV FVLRYVYTLW
RSRNGIAIQP KPQRSGPAAL WGTFAGYGSF VAHAGGPPFQ IYALPLKLAP REYTGTIVRF
FATLNAVKLI PYFALGQLDL SNLKTSATLF PLAMAATACG AWIVRRMKPQ VFYPFMYMMA
FVAGWKLVWD GLGSVMSGTL