| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2653 |
|---|
| Symbol | pgk |
|---|
| ID | 5323522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2756802 |
|---|
| End bp | 2758001 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640791597 |
|---|
| Product | phosphoglycerate kinase |
|---|
| Protein accession | YP_001328318 |
|---|
| Protein GI | 150397851 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0126] 3-phosphoglycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTCA AGACTCTCGA CGATCTGACC GACATCGCCG GCAAGCGCGT CCTCGTGCGC
GTCGACCTGA ACGTGCCGGT CAAGGACGGT CAGGTGACCG ACACCACCCG CATCGAGCGC
GTGGCGCCGA CCATCCGCGA GCTCTCCGAA AAGGGTGCGA AAGTCGTCCT GCTCGCACAT
TTCGGGCGGC CGAAGGGCGA ACCGGTCGCC GACATGTCGC TGAAGACAAT CGCCTCCGCC
GTCGAGGAGA TCCTCGACCA GCGGGTCTAT TTCGCGCCCG ACTGCATCGG CGACAAAGCC
GCCAATGCGA TTGCCGATTT GAATGACGGC GAAGTCCTGC TCCTCGAGAA CACCCGATTC
CACAAGGGCG AGGAGAAGAA TGATCCGGCC TTCGTCACGG CGCTCGCCGC CAATGGCGAC
ATCTACGTCA ACGACGCCTT CTCCGCCGCC CATCGCGCGC ACGCCTCCAC CGAGGGTCTG
GCCCAGCATC TTCCCGCCTA TGCAGGCCGC ACCATGCAGG CGGAGCTGGA AGCGCTGGAG
AAGGGGCTCG GCAATCCGCA GCGTCCAGTC GTCGCGATCG TCGGCGGCGC CAAGGTCTCT
ACCAAGATCG ACCTTTTGCA GAATCTCGTG AAGAAGGTCG ATGCGCTGGT CATCGGCGGC
GGGATGGCCA ACACCTTTCT CGCCGCGCAA GGCGTGGATG TCGGGAAGTC TCTCTGCGAG
CACGACCTTG CGGAAACCGC CAAGGCCATC CTCGCGGCCG CCTCGGAGGC GGGATGCGCG
ATCGTGCTTC CGGTGGACGG GGTTGTCGCC CGTGAATTCA AGGCCGGCGC CGACAATGAG
GTCGTCGACG TCAAGGCCAT CCCTGCCGAC GCCATGATGC TCGACGTCGG TCCGAAGTCG
ATCGACGCGA TCAACGAATG GATCTCGCGC GCCGAAACCC TCGTATGGAA CGGCCCGCTC
GGCGCCTTCG AGATCACACC CTTCGACAAG GCGACCGTGG CGGCGGCGAA ACATGCGGCA
GCCCGCACGC GCTCCGGCTC GCTCGTTTCG GTCGCCGGTG GCGGCGATAC CGTTGCGGCA
CTCAATCATG CCGAGGTGGC TGACGACTTT ACCTATGTGT CGACAGCCGG CGGCGCCTTC
CTCGAATGGA TGGAGGGCAA GCCCCTGCCG GGCGTCGATA TTCTCAAGCA GCAGAGGTGA
|
|---|
| Protein sequence | MTFKTLDDLT DIAGKRVLVR VDLNVPVKDG QVTDTTRIER VAPTIRELSE KGAKVVLLAH
FGRPKGEPVA DMSLKTIASA VEEILDQRVY FAPDCIGDKA ANAIADLNDG EVLLLENTRF
HKGEEKNDPA FVTALAANGD IYVNDAFSAA HRAHASTEGL AQHLPAYAGR TMQAELEALE
KGLGNPQRPV VAIVGGAKVS TKIDLLQNLV KKVDALVIGG GMANTFLAAQ GVDVGKSLCE
HDLAETAKAI LAAASEAGCA IVLPVDGVVA REFKAGADNE VVDVKAIPAD AMMLDVGPKS
IDAINEWISR AETLVWNGPL GAFEITPFDK ATVAAAKHAA ARTRSGSLVS VAGGGDTVAA
LNHAEVADDF TYVSTAGGAF LEWMEGKPLP GVDILKQQR
|
|---|
| |