Gene Smed_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2648 
Symbol 
ID5323517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2752126 
End bp2752503 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content60% 
IMG OID640791592 
Producthypothetical protein 
Protein accessionYP_001328313 
Protein GI150397846 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.404391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGG TGACGGTGAC GATCGACGGC AAGGCCTACC GTATGGCCTG CGAGGAAGGG 
CAGGAGGATC ATCTCAGCGA CCTCGCTACC CGGTTCGATC AATATGTAGG GCATTTGAAG
GCCCAGTTCG GCGAGATCGG TGACCTCAGG CTCACCGTCA TGGCAGGTAT AATGGTCATG
GACGAGCTGA GCGAGGTCAA TCGCCGGCTG AAGAGCATCG AGGCCGAAGT GGACGACCTG
AAGAGAGGCC GCGATACCGC GCTTTCGGAT CAGACGAGAA GCGAGGAGGC GCTTGCCTTC
GCGCTTGGAG AGGTGACGGC GCAGATTCAG GATATCGCCG CCAAACTCAA CGGGCGGCCA
ATTCCCCCGG CAAATTGA
 
Protein sequence
MAQVTVTIDG KAYRMACEEG QEDHLSDLAT RFDQYVGHLK AQFGEIGDLR LTVMAGIMVM 
DELSEVNRRL KSIEAEVDDL KRGRDTALSD QTRSEEALAF ALGEVTAQIQ DIAAKLNGRP
IPPAN