| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2644 |
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| Symbol | |
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| ID | 5323513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2747426 |
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| End bp | 2748583 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791588 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001328309 |
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| Protein GI | 150397842 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGAA AGTGGCGTTT GCCGGCCGTC GCCGGCGTTT TCGTCTCCCT TCTCGTCTCG
ATCCCGGCGG TGGCGCAGGA CGCGCAGATG CCGACCGTGA CCGTTGCCAA ACCAGTCGTG
CGCGACGTCG TCGACGCCGA CGAATTCATC GGCCGTTTCG AAGCGGTCGA TGAGGTTTCG
ATCCGCGCGC GGGTCGGAGG CTATCTCGAC CAGGTCTTCT TCACCGATGG TGCGCTGGTG
AAGAAGGGCG ACAAGCTCTT CGTCATCGAC CAGCGGCCGT TTCGAACCGC TCTGTCCCAG
GCGGAAGCCT CGCTCGAGGC GGCGCGCTCG ACGCTCGTGT TTGCAGAGAC GACGTTCAAA
CGGACGGAGT CCCTGGCCGG GTCTGGCACC CTGTCCGTGT CACGGCTGGA CGATGACCGC
CGCGCGCTGA TTGCGGCGCA GGCGAATGTG CGCGGAGCCG AGGCGGCCGT CGAGCGGGCC
AAGCTCGACC TAGACTACAC GACCATCACA GCCCCTCTGA GCGGCCGCGT CGATCGGAGG
CTCATCTCCA CCGGAAATCT CGTCCAGGCG GACCAGACGA TACTGACGAC GATCGTCTCT
CTTGACCCGA TCGATTTTTA TTTCGACGTC GATGAGCGCC GGCTGCTTTC CTACGCCCGT
ACCGCCCGGG ATCGCGGCAG CGCGCTGCAG GAAGGGGCAG GCTCGATTCC GGTGCTGGTG
ACGATCGCCG ACGCCAACGA GCAGCCATTC GAAGGCAAGC TCGATTTTGC GGAGAACCGC
GTCGACAGCG AAACCGGCAC GATGCGGGTG CGCGCCCGCT TCCCGAATCC AAAATTCGTC
CTGCAGCCCG GCCTGTTCGG GCGTGTGGAA GTCGAAGGCT CGAACACCTA TCGGGCAGTC
CTCGTGCCTG ACCAGGCAAT TGCCGCCGAC CAGAACGAAC GCGTCGTCTA CGTCGTGGGC
GAAGACGGCA GCGTCTCGAC CAGGCCGGTG CGCCTCGGGC CGAGGCTTCA CGGTTATCGG
GTGATCCGCA GCGGCATGAC AGGAGACGAG ACGATCGTCG TCAACGGCCT CATGCGCGTG
CGGCCGGGCG TGAAGGTGAA GCCCGAAATC GTCGTCCTGC CCCCAGAGGC TGCGCAATCG
GCGGAGAACG CCCAATGA
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| Protein sequence | MLRKWRLPAV AGVFVSLLVS IPAVAQDAQM PTVTVAKPVV RDVVDADEFI GRFEAVDEVS
IRARVGGYLD QVFFTDGALV KKGDKLFVID QRPFRTALSQ AEASLEAARS TLVFAETTFK
RTESLAGSGT LSVSRLDDDR RALIAAQANV RGAEAAVERA KLDLDYTTIT APLSGRVDRR
LISTGNLVQA DQTILTTIVS LDPIDFYFDV DERRLLSYAR TARDRGSALQ EGAGSIPVLV
TIADANEQPF EGKLDFAENR VDSETGTMRV RARFPNPKFV LQPGLFGRVE VEGSNTYRAV
LVPDQAIAAD QNERVVYVVG EDGSVSTRPV RLGPRLHGYR VIRSGMTGDE TIVVNGLMRV
RPGVKVKPEI VVLPPEAAQS AENAQ
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