| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2638 |
|---|
| Symbol | ruvA |
|---|
| ID | 5323507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2740014 |
|---|
| End bp | 2740631 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640791582 |
|---|
| Product | Holliday junction DNA helicase RuvA |
|---|
| Protein accession | YP_001328303 |
|---|
| Protein GI | 150397836 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
|---|
| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCA AGCTGAAAGG CACCATAGAC GAGATCGGCG AGGATCATGT GGTACTCGAC
GTGCATGGCG TCGGATATGT CGCCCATTGT TCGGCGCGCA CGCTCGCAAA GCTCGGAAGG
GCGGGAGAGG CGGCCGTGCT CTTCATCGAG ACCTATGTGC GCGAGGATCA GCTGAAGCTG
TTCGGCTTTC TGAGCGCATT GGAGCGTGAA TGGTTCCGGC TGCTTCAGAG CGTTCAGGGT
GTGGGGTCCA AGGTCGCGCT GGCGGTTCTT TCCACGCTGA CTCCGGGCGA ACTCGCCAAT
GCCATCGCAC TGCAGGACAA GACGTCGATC TCGCGCGCGC CGGGTGTCGG CCCGAAAGTC
GCCGTGCGCA TCGTCACCGA ACTCAAGAAC AAGGCCCCCG CTTTCGTCGG CGAGATGGCA
CCGTCGATCG GCCTAAAGCA GGAACTCGGG GAAGGCGTTG CCGCCGCGCC GGTCTCGGAT
GCGGTCTCGG CGCTCACCAA TCTCGGCTAT TCGCGCGACC AGGCTGCGAA TGCCGTTGCA
GCCGCGCTGA AAAACGGCGG GGAGGGCGCC GACAGCGCCA GGCTGATCCG CCTTGGCCTC
AAGGAACTGT CGCGGTGA
|
|---|
| Protein sequence | MIGKLKGTID EIGEDHVVLD VHGVGYVAHC SARTLAKLGR AGEAAVLFIE TYVREDQLKL
FGFLSALERE WFRLLQSVQG VGSKVALAVL STLTPGELAN AIALQDKTSI SRAPGVGPKV
AVRIVTELKN KAPAFVGEMA PSIGLKQELG EGVAAAPVSD AVSALTNLGY SRDQAANAVA
AALKNGGEGA DSARLIRLGL KELSR
|
|---|
| |